LOCUS UQS87004.1 609 aa PRT BCT 19-SEP-2022 DEFINITION Nicoliella spurrieriana DNA polymerase III subunit gamma/ tau protein. ACCESSION CP093361-97 PROTEIN_ID UQS87004.1 SOURCE Nicoliella spurrieriana ORGANISM Nicoliella spurrieriana Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Nicoliella. REFERENCE 1 (bases 1 to 1709727) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1709727) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 6375x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:59:34 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,728 CDSs (total) :: 1,646 Genes (coding) :: 1,628 CDSs (with protein) :: 1,628 Genes (RNA) :: 82 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 64 ncRNAs :: 3 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 8 of 18 Pseudo Genes (incomplete) :: 5 of 18 Pseudo Genes (internal stop) :: 8 of 18 Pseudo Genes (multiple problems) :: 3 of 18 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Nicoliella spurrieriana" /mol_type="genomic DNA" /strain="SGEP1_A5" /isolation_source="Honey" /host="Tetragonula carbonaria" /type_material="type strain of Nicolia spurrieriana" /db_xref="taxon:2925830" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-03-26" protein /gene="dnaX" /locus_tag="MOO44_02185" /EC_number="2.7.7.7" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003706519.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology. GO_component: GO:0009360 - DNA polymerase III complex [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_process: GO:0006260 - DNA replication [Evidence IEA]" /transl_table=11 BEGIN 1 MSYQALYRVW RPQRFADLVG QPVITETLKN TIITNQISHA YLFAGPRGTG KTSAAKIFAK 61 AVNCPNAKDG EPCNECSICK AITNGTLNDV IEIDAASNNG VDEIRDIRDK AKYAPTEATY 121 KVYIIDEVHM LSTGAFNALL KTLEEPPTNV IFILATTEPH KLPATIISRT QRFDFKRIQP 181 KDILERMEYI LKQKDVKYDD KALRVIARAA EGGMRDALSI LDQTMSYGDD VVTYENALQV 241 TGSVTTSLLT EFVSEVAHQD VKAALVSVRK IVDAGKDANQ FIEDLISYYQ NTLLYKQAPE 301 MVLEQELGIV DDQFKQIATD ANANVIYQII EILNDIQQQM RYTLHPDVYL EVLTVKIATL 361 NRGGVEGSAA DSKQIEQLTG EINDLKQQLS ALKQSVITTD SKPQAQSTPK QSATPQPAPV 421 KKQSAPSHRV NLEKIYPILD HATRSDLNRI KSSWAELVQN LDVVQRSLMN IANPVAASSS 481 GVVLSFSYDI FYQKAVNDRS LIDAIGNGFD RIIGYAPDLS FVPEEQWQQI RKDYYNHKRM 541 RGNANQPAPS AEQSSAPKQH SNAAGNDNSD EPPLPIDDQG VHEQASAEPD VVTKAEELFG 601 KDILDVKND //