LOCUS       UQS86517.1               420 aa    PRT              BCT 19-SEP-2022
DEFINITION  Nicoliella spurrieriana NCS2 family nucleobase:cation
            symporter protein.
ACCESSION   CP093361-880
PROTEIN_ID  UQS86517.1
SOURCE      Nicoliella spurrieriana
  ORGANISM  Nicoliella spurrieriana
            Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
            Nicoliella.
REFERENCE   1  (bases 1 to 1709727)
  AUTHORS   Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
            and Jiranek,V.
  TITLE     Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
            sp. nov., Bombilactobacillus folatiphilus sp. nov. and
            Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
            bacterial isolates from stingless bees Tetragonula carbonaria and
            Austroplebeia australis
  JOURNAL   Int J Syst Evol Microbiol 72 (9) (2022)
   PUBMED   36094463
REFERENCE   2  (bases 1 to 1709727)
  AUTHORS   Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
            Jiranek,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
            PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2020
            Assembly Method        :: Smrtlink v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 6375x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/14/2022 11:59:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,728
            CDSs (total)                      :: 1,646
            Genes (coding)                    :: 1,628
            CDSs (with protein)               :: 1,628
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 8 of 18
            Pseudo Genes (incomplete)         :: 5 of 18
            Pseudo Genes (internal stop)      :: 8 of 18
            Pseudo Genes (multiple problems)  :: 3 of 18
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nicoliella spurrieriana"
                     /mol_type="genomic DNA"
                     /strain="SGEP1_A5"
                     /isolation_source="Honey"
                     /host="Tetragonula carbonaria"
                     /type_material="type strain of Nicolia spurrieriana"
                     /db_xref="taxon:2925830"
                     /country="Australia: Brisbane"
                     /lat_lon="27.4810 S 153.0121 E"
                     /collection_date="2020-03-26"
     protein         /locus_tag="MOO44_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014940476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology. GO_component:
                     GO:0016021 - integral component of membrane [Evidence
                     IEA]; GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]; GO_process:
                     GO:0015851 - nucleobase transport [Evidence IEA]"
                     /transl_table=11
BEGIN
        1 MNNLFHNDDA VLDVNDKPKF LPWIGLSLQH MFSMFGSTVI VPLLVGLSPS IALFSSGVGT
       61 LLHILITKRQ IPAYMGSSFA FIVPMAALMK TTGYPGIAQG VVTVGIVYLI VAGLIAMIGK
      121 DWIDHLLPPI VVGPIIIVIG LSLAGSAAKD AMMNNNHYDI KFFMIALLTL CLAVFFNMYL
      181 KGFLGLIPIL LAIVCGYLVS IFAGLVNVSA IAKAPWFEVP PFEVPFINYA FHLNIGAIIA
      241 IAPIAFVTMT EHIGHIMVLN ELTHRDYFKS PGLNRTLAGD GAASIAAGLL GGPAVTSYGE
      301 NIGVMAITKV HSVYVLMGAA MFAIIFAFVN KLNVLIMQMP APVIGGISFL LFGTIAASGI
      361 KLMIEQHVDL DRKRNLMIAS IILVIGVGNA YLQIGNQFQF TGLALATVFG IILNLLLPRK
//