LOCUS UQS85720.1 475 aa PRT BCT 19-SEP-2022 DEFINITION Apilactobacillus apisilvae arginine-ornithine antiporter protein. ACCESSION CP093362-534 PROTEIN_ID UQS85720.1 SOURCE Apilactobacillus apisilvae ORGANISM Apilactobacillus apisilvae Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Apilactobacillus. REFERENCE 1 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 11482x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:52:50 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,575 CDSs (total) :: 1,494 Genes (coding) :: 1,480 CDSs (with protein) :: 1,480 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 5 of 14 Pseudo Genes (incomplete) :: 11 of 14 Pseudo Genes (internal stop) :: 1 of 14 Pseudo Genes (multiple problems) :: 3 of 14 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Apilactobacillus apisilvae" /mol_type="genomic DNA" /strain="SG5_A10" /isolation_source="Bee" /host="Austroplebeia australis" /type_material="type strain of Apilactobacillus apisilvae" /db_xref="taxon:2923364" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-04-30" protein /gene="arcD" /locus_tag="MOO46_02785" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_002820806.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology. GO_component: GO:0005887 - integral component of plasma membrane [Evidence IEA]; GO_function: GO:0043858 - arginine:ornithine antiporter activity [Evidence IEA]; GO_process: GO:0006527 - arginine catabolic process [Evidence IEA]" /transl_table=11 BEGIN 1 MGNSAKKLNL YELIGLVVGS IIGGGVFNLM NDISANAGAG AVIIGWIITG IGMLSLALTF 61 QNLTIKRPDL QAGVYSYAEA GFGRYMGFNS AWGYWLSVWL GNISYATLLM SALTYFFPIF 121 DNGHNLISFG VGSIFLWICH FLILRGIQSA SFINTIITFT KLIPLFLFIV IMIIAFKLNV 181 FTTDFWLMGN KPFNFSDVLG QVKSTMLVTV WVFSGIEGAV IFSGYAKKRK DVGRATVLGI 241 VIVALIYMLV TLLSFGVMKQ AQLSHLGQPA MAYLLQSLIG KWGAIIVNIG LIISVIGAWL 301 SWTMFASEVP YEAAKVGTFP KTFAKENKNG APINSLIFTN VLVEIFMVSF LVSSSAYHLF 361 YSISSAAVLI PYAFSAFYQL KYSYLDDKTP SRNKNLFVGI IASIYSFWLL YAAGLNFMLL 421 ATILFAAGIP VYYYLQKFDN KESIVFNNIE RFIAVILFIF AIIALYCLIN GLITV //