LOCUS       UQS85694.1               668 aa    PRT              BCT 19-SEP-2022
DEFINITION  Apilactobacillus apisilvae excinuclease ABC subunit UvrB protein.
ACCESSION   CP093362-59
PROTEIN_ID  UQS85694.1
SOURCE      Apilactobacillus apisilvae
  ORGANISM  Apilactobacillus apisilvae
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Apilactobacillus.
REFERENCE   1  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
            and Jiranek,V.
  TITLE     Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
            sp. nov., Bombilactobacillus folatiphilus sp. nov. and
            Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
            bacterial isolates from stingless bees Tetragonula carbonaria and
            Austroplebeia australis
  JOURNAL   Int J Syst Evol Microbiol 72 (9) (2022)
   PUBMED   36094463
REFERENCE   2  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
            Jiranek,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
            PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2020
            Assembly Method        :: Smrtlink v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11482x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/14/2022 11:52:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,575
            CDSs (total)                      :: 1,494
            Genes (coding)                    :: 1,480
            CDSs (with protein)               :: 1,480
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 5 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            Pseudo Genes (multiple problems)  :: 3 of 14
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Apilactobacillus apisilvae"
                     /mol_type="genomic DNA"
                     /strain="SG5_A10"
                     /isolation_source="Bee"
                     /host="Austroplebeia australis"
                     /type_material="type strain of Apilactobacillus apisilvae"
                     /db_xref="taxon:2923364"
                     /country="Australia: Brisbane"
                     /lat_lon="27.4810 S 153.0121 E"
                     /collection_date="2020-04-30"
     protein         /gene="uvrB"
                     /locus_tag="MOO46_00300"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019253276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology. GO_component:
                     GO:0009380 - excinuclease repair complex [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]; GO_process: GO:0006289 -
                     nucleotide-excision repair [Evidence IEA]"
                     /transl_table=11
BEGIN
        1 MNREENNHFE LVSKYKPTGD QPEAIKKLTD GFNNGQKSQI LLGATGTGKT FTISNVIKNV
       61 NRPTLILSHN KTLAGQLYGE FKEFFPNNAV EYFVSYYDYY QPEAYVPSSD TYIEKDSSVN
      121 DEIDKLRHAA TNALLTRNDV IIVASVSSIF GLGSPEEYFK HTVSLHVGQQ IERDDLLRQL
      181 VEIQFDRNDI DFQRGRFRVH GDVVDIFPAS GDKHAFRVEF FGDEIDSIRE IDTLTGEFFG
      241 KKDNIIIFPA THFLTDNEHL DTALSDIKKE MNEQVDKFKS EGKLVEAQRL KQRTTYDVEM
      301 MAEMGYTNGI ENYSRFMDGR KPGEPPYTLL DFFPEDYLLV VDESHQTLPQ IGGMYKGDKA
      361 RKEQLINYGF RLPSALDNRP LKMPEFKTHI NQAIYMSATP GPRELEMTDE KNIVQQIIRP
      421 TGLLDPTVEV RPIMGQMDDL VGEINKRIDN NERTFVTTLT KKMAEDLTDY LKDLGIKVAY
      481 LHSDVKTLER TKIIRDLRLG KYDVLVGINL LREGIDVPEV SLVAILDADK EGFLRNERSL
      541 IQTIGRAARN ENGSVVMYAD KVTDSMQKAM DETARRRKIQ QTYNQEHGIT PHTIKKPIRD
      601 LIKYDDNDKN EKESHSFVES DFQKMTKKEQ QSMLETLNKE MRHAAVQLDF EQAASLRDTI
      661 LDLKSEMK
//