LOCUS UQS85694.1 668 aa PRT BCT 19-SEP-2022 DEFINITION Apilactobacillus apisilvae excinuclease ABC subunit UvrB protein. ACCESSION CP093362-59 PROTEIN_ID UQS85694.1 SOURCE Apilactobacillus apisilvae ORGANISM Apilactobacillus apisilvae Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Apilactobacillus. REFERENCE 1 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 11482x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:52:50 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,575 CDSs (total) :: 1,494 Genes (coding) :: 1,480 CDSs (with protein) :: 1,480 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 5 of 14 Pseudo Genes (incomplete) :: 11 of 14 Pseudo Genes (internal stop) :: 1 of 14 Pseudo Genes (multiple problems) :: 3 of 14 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Apilactobacillus apisilvae" /mol_type="genomic DNA" /strain="SG5_A10" /isolation_source="Bee" /host="Austroplebeia australis" /type_material="type strain of Apilactobacillus apisilvae" /db_xref="taxon:2923364" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-04-30" protein /gene="uvrB" /locus_tag="MOO46_00300" /EC_number="3.1.25.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019253276.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology. GO_component: GO:0009380 - excinuclease repair complex [Evidence IEA]; GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005515 - protein binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO_process: GO:0006289 - nucleotide-excision repair [Evidence IEA]" /transl_table=11 BEGIN 1 MNREENNHFE LVSKYKPTGD QPEAIKKLTD GFNNGQKSQI LLGATGTGKT FTISNVIKNV 61 NRPTLILSHN KTLAGQLYGE FKEFFPNNAV EYFVSYYDYY QPEAYVPSSD TYIEKDSSVN 121 DEIDKLRHAA TNALLTRNDV IIVASVSSIF GLGSPEEYFK HTVSLHVGQQ IERDDLLRQL 181 VEIQFDRNDI DFQRGRFRVH GDVVDIFPAS GDKHAFRVEF FGDEIDSIRE IDTLTGEFFG 241 KKDNIIIFPA THFLTDNEHL DTALSDIKKE MNEQVDKFKS EGKLVEAQRL KQRTTYDVEM 301 MAEMGYTNGI ENYSRFMDGR KPGEPPYTLL DFFPEDYLLV VDESHQTLPQ IGGMYKGDKA 361 RKEQLINYGF RLPSALDNRP LKMPEFKTHI NQAIYMSATP GPRELEMTDE KNIVQQIIRP 421 TGLLDPTVEV RPIMGQMDDL VGEINKRIDN NERTFVTTLT KKMAEDLTDY LKDLGIKVAY 481 LHSDVKTLER TKIIRDLRLG KYDVLVGINL LREGIDVPEV SLVAILDADK EGFLRNERSL 541 IQTIGRAARN ENGSVVMYAD KVTDSMQKAM DETARRRKIQ QTYNQEHGIT PHTIKKPIRD 601 LIKYDDNDKN EKESHSFVES DFQKMTKKEQ QSMLETLNKE MRHAAVQLDF EQAASLRDTI 661 LDLKSEMK //