LOCUS UQS85250.1 810 aa PRT BCT 19-SEP-2022
DEFINITION Apilactobacillus apisilvae AAA family ATPase protein.
ACCESSION CP093362-238
PROTEIN_ID UQS85250.1
SOURCE Apilactobacillus apisilvae
ORGANISM Apilactobacillus apisilvae
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Apilactobacillus.
REFERENCE 1 (bases 1 to 1469670)
AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
and Jiranek,V.
TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
sp. nov., Bombilactobacillus folatiphilus sp. nov. and
Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
bacterial isolates from stingless bees Tetragonula carbonaria and
Austroplebeia australis
JOURNAL Int J Syst Evol Microbiol 72 (9) (2022)
PUBMED 36094463
REFERENCE 2 (bases 1 to 1469670)
AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
Jiranek,V.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: NOV-2020
Assembly Method :: Smrtlink v. 9.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 11482x
Sequencing Technology :: PacBio Sequel II
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 03/14/2022 11:52:50
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 1,575
CDSs (total) :: 1,494
Genes (coding) :: 1,480
CDSs (with protein) :: 1,480
Genes (RNA) :: 81
rRNAs :: 5, 5, 5 (5S, 16S, 23S)
complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)
tRNAs :: 63
ncRNAs :: 3
Pseudo Genes (total) :: 14
CDSs (without protein) :: 14
Pseudo Genes (ambiguous residues) :: 0 of 14
Pseudo Genes (frameshifted) :: 5 of 14
Pseudo Genes (incomplete) :: 11 of 14
Pseudo Genes (internal stop) :: 1 of 14
Pseudo Genes (multiple problems) :: 3 of 14
CRISPR Arrays :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Apilactobacillus apisilvae"
/mol_type="genomic DNA"
/strain="SG5_A10"
/isolation_source="Bee"
/host="Austroplebeia australis"
/type_material="type strain of Apilactobacillus apisilvae"
/db_xref="taxon:2923364"
/country="Australia: Brisbane"
/lat_lon="27.4810 S 153.0121 E"
/collection_date="2020-04-30"
protein /locus_tag="MOO46_01290"
/inference="COORDINATES: protein motif:HMM:NF024573.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MKINKIEIYG YGKWHDVTFD LNKNNLQLIY GNNESGKTTL LSLIEGILFG YLNGRGNKYS
61 QYIPKDSNAY GGSLTIKTED NRNFIIKRVA GKYGGDLSIY DLDNECDTDN DVLKNILGPI
121 DRPTFENLFY FGDINIKDIT KLSDTDLIER IQKVGFVGSS DWINIRAQLD KESRNLYAPK
181 GRKPPLNQKL KSYDNLLLKI NESKSSLNNY KNLLIQFNSI NEENISLKHF IDNLNKEIDQ
241 LKNHKSKWPL YEKLIDLKPI KVKDGFDNNA QNQLYKLNNS IKLNKNQIDI LDNQINEIQN
301 KINKDSELVF YEQNQDKINE LFNNYDKIND LNSFLKVKQE ILKETHDSLS SNPLPITKDD
361 KNNITDLQKA LNNNPVKVNN KLIISLIALG VILLLLPGTL KLLCIALFII SGYLYYSNKN
421 KLNYQSRINE KINSYRVKYN FSDNNIDNWF ILDDNYRNNN VNDYSKDINE LLSKIENYFS
481 QWKFSKNYLS LGDNYDQNLS NINQFITRNN KLIDENKRYS EDLNRYLLKK DELVKANVEI
541 TTEINKFFSV RSVNNQSEFD YEMNNQHKAI QINNQRQNIK SQLDDNEINK LKSFKNKEDI
601 NEALKKKLDL QNTKQQHLLS NSQKAEKVKV NIDELTKNGT YQELQQKKAN LEAEINDLVD
661 EWLTTKLSFN WINQALNIAT ADRIPLFQQK AQEYFGTLTN NNYIKITYFK NKLKVTRNDK
721 TQFDIGELSR GTIEQLYLSL LLSLSVVFGR DYKLPIIIDD GFSEFDIDRS NNAFKLLEDI
781 SKSLQVIYVT CNHDVLDYFD KSIILSLNKK
//