LOCUS UQS85082.1 950 aa PRT BCT 19-SEP-2022 DEFINITION Apilactobacillus apisilvae excinuclease ABC subunit UvrA protein. ACCESSION CP093362-60 PROTEIN_ID UQS85082.1 SOURCE Apilactobacillus apisilvae ORGANISM Apilactobacillus apisilvae Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Apilactobacillus. REFERENCE 1 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 11482x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:52:50 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,575 CDSs (total) :: 1,494 Genes (coding) :: 1,480 CDSs (with protein) :: 1,480 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 5 of 14 Pseudo Genes (incomplete) :: 11 of 14 Pseudo Genes (internal stop) :: 1 of 14 Pseudo Genes (multiple problems) :: 3 of 14 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Apilactobacillus apisilvae" /mol_type="genomic DNA" /strain="SG5_A10" /isolation_source="Bee" /host="Austroplebeia australis" /type_material="type strain of Apilactobacillus apisilvae" /db_xref="taxon:2923364" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-04-30" protein /gene="uvrA" /locus_tag="MOO46_00305" /EC_number="3.1.25.-" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010620571.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology. GO_function: GO:0003677 - DNA binding [Evidence IEA]; GO_function: GO:0005524 - ATP binding [Evidence IEA]; GO_function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO_process: GO:0006289 - nucleotide-excision repair [Evidence IEA]" /transl_table=11 BEGIN 1 MQNDKIIIKG ARAHNLKNIN VEIPKNKLTV MTGLSGSGKS SLAFDTLYAE GQRRYVESLS 61 SYARQFLGQM DKPDVDSIEG LSPAIAIDQK TTSHNPRSTV GTVTEINDYF RLLWARVGTP 121 ICPNDGTKIT RQSIDQMIDE IMALPERTKL QILSPVVRES RGQHKKTFDK IQREGFVRYR 181 LDGEIHEIGD GIVPEKSKKH NIDIVVDRII VKDGIKSRLS DSLETALRLS GGYATADLMG 241 KGDNLIFSEH YACPLCGFTI SELEPRLFSF NSPIGACPDC DGLGMKLDVD ESLVIPDKNK 301 TLKDGAIDPW NPISSKFYPS LLEQACDAFN IDMDIPFKKL PKKKRDLILN GSNGKEFHFH 361 FDSSFGGVRD TDAPFEGVLR NISRRYNSTN SDFTREQMRK YMTELTCQTC NGYRLNREAL 421 SVKIDGQNIS EITNLDINKE LAFFKQLTFG EKDTTIAKPI LKEIIDRLSF LRNVGLDYLT 481 LSRTAGTLSG GESQRIRLAT QIGSNLSGVL YVLDEPSIGL HQRDNDRLIK SLKSMRDLGN 541 TLVVVEHGED TMLASDYIVD IGPGAGSNGG KVMAVGTPEE VANNDQSLTG QYLSGKKYIS 601 VPLKRRKGNN KHIKVKGASE NNLKNVDVDI PLGEFNVITG VSGSGKSTLI NRVLKRALAQ 661 KLNNNSEKPG KYKSISGYKN IDKLINIDQS PIGRTPRSNP ATYTGVFDDI RELFAETNEA 721 KLRGYQKGRF SFNVKGGRCE TCHGDGILKI EMNFLPDVYV PCEVCHGKRY NNETLEVQYK 781 GKNIADVLDM TVKDALSFFE AMPKITRKLK TINEVGLGYV KLGQSATTLS GGEAQRMKLA 841 AELYKKSAGN NLYILDEPTI GLHTDDIKRL LVVLHELVDQ GNTILIIEHN LDVIKTADHI 901 IDLGPEGGEG GGNIIATGTP EEIIKVKNSY TGQYLSPILK RDLKRTKDDK //