LOCUS       UQS84996.1               538 aa    PRT              BCT 19-SEP-2022
DEFINITION  Apilactobacillus apisilvae CTP synthase protein.
ACCESSION   CP093362-1347
PROTEIN_ID  UQS84996.1
SOURCE      Apilactobacillus apisilvae
  ORGANISM  Apilactobacillus apisilvae
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Apilactobacillus.
REFERENCE   1  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
            and Jiranek,V.
  TITLE     Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
            sp. nov., Bombilactobacillus folatiphilus sp. nov. and
            Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
            bacterial isolates from stingless bees Tetragonula carbonaria and
            Austroplebeia australis
  JOURNAL   Int J Syst Evol Microbiol 72 (9) (2022)
   PUBMED   36094463
REFERENCE   2  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
            Jiranek,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
            PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2020
            Assembly Method        :: Smrtlink v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11482x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/14/2022 11:52:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,575
            CDSs (total)                      :: 1,494
            Genes (coding)                    :: 1,480
            CDSs (with protein)               :: 1,480
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 5 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            Pseudo Genes (multiple problems)  :: 3 of 14
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Apilactobacillus apisilvae"
                     /mol_type="genomic DNA"
                     /strain="SG5_A10"
                     /isolation_source="Bee"
                     /host="Austroplebeia australis"
                     /type_material="type strain of Apilactobacillus apisilvae"
                     /db_xref="taxon:2923364"
                     /country="Australia: Brisbane"
                     /lat_lon="27.4810 S 153.0121 E"
                     /collection_date="2020-04-30"
     protein         /locus_tag="MOO46_07085"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013728366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology. GO_function:
                     GO:0003883 - CTP synthase activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]; GO_process:
                     GO:0006241 - CTP biosynthetic process [Evidence IEA]"
                     /transl_table=11
BEGIN
        1 MTKYVFVTGG VVSSLGKGIV SASLGRLLKN RGLNVTIQKF DPYINVDPGT MSPYQHGEVF
       61 VTNDGTETDL DLGHYERFID NDLNKYSNVT TGKIYSEVLR KERRGDYLGA TVQVIPHITG
      121 MIKEKIMRAA KVTNADIVIT EIGGTVGDIE SLPFLEAIRQ MKAEVGGDNV FYIHTTLIPY
      181 LRAAGEMKTK PTQHSVKELR GLGIQPNLLV VRTEQDVTDD MKRKIALFCD VKPEAVVESK
      241 DAPTLYTIPL MLQAQNMDQQ VLDHFGLETP KADMTEWKKL EHKVQNLSKE INITLVGKYV
      301 KLKDAYISIT ESLKHAGYPL DAKVNLKMLN SEKVNEDNVK DLLSDADGIL VPGGFGDRGI
      361 EGMITAVKYA RENDVPYFGI CLGMQIASIE FARDVLGYKD ANTTEIDQDT PHKIIDLMAD
      421 QSDIDGMGGT QRLGAYPCKL VPGTKTAAAY DNKAEISERH RHRYEYNNEY RQEMEDNGLV
      481 ISGTSPDNHL VEVIEIPANK FFIAAQYHPE FLSRPTRPEG LFKSFVEAAN EQHDINNK
//