LOCUS       UQS84943.1               684 aa    PRT              BCT 19-SEP-2022
DEFINITION  Apilactobacillus apisilvae hypothetical protein protein.
ACCESSION   CP093362-1291
PROTEIN_ID  UQS84943.1
SOURCE      Apilactobacillus apisilvae
  ORGANISM  Apilactobacillus apisilvae
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Apilactobacillus.
REFERENCE   1  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
            and Jiranek,V.
  TITLE     Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
            sp. nov., Bombilactobacillus folatiphilus sp. nov. and
            Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
            bacterial isolates from stingless bees Tetragonula carbonaria and
            Austroplebeia australis
  JOURNAL   Int J Syst Evol Microbiol 72 (9) (2022)
   PUBMED   36094463
REFERENCE   2  (bases 1 to 1469670)
  AUTHORS   Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
            Jiranek,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
            PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2020
            Assembly Method        :: Smrtlink v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11482x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/14/2022 11:52:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,575
            CDSs (total)                      :: 1,494
            Genes (coding)                    :: 1,480
            CDSs (with protein)               :: 1,480
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 5 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            Pseudo Genes (multiple problems)  :: 3 of 14
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Apilactobacillus apisilvae"
                     /mol_type="genomic DNA"
                     /strain="SG5_A10"
                     /isolation_source="Bee"
                     /host="Austroplebeia australis"
                     /type_material="type strain of Apilactobacillus apisilvae"
                     /db_xref="taxon:2923364"
                     /country="Australia: Brisbane"
                     /lat_lon="27.4810 S 153.0121 E"
                     /collection_date="2020-04-30"
     protein         /locus_tag="MOO46_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /transl_table=11
BEGIN
        1 MQSNLKKSLY LGLAALSFAS VASVTATASN ANAASKKAAA KKVTYKTTNR NLDQSVVFAS
       61 TGKNAVYSKP GTVKGAKVVA TKADMGSKAN SKSVNDNFMA YQEAVTSKGV HYYKVVSFDK
      121 KVRGYVYVGG VNKVDGKTST ATPSNTTGYL KSNRVFNVAY GSQFGAKLKN FNGIDFSTHK
      181 FTVNDAVQVR NGAKYYNVTD QSNAMVNGWV NADYFSNDAT DAVNQAQNNS KAVKLTFYNV
      241 DNSGIVMSSK SVQPNGGFYD ISKDLNTPIT SYSKGEVLDA INASLVGTGY TATGVYNNVT
      301 NPNQPVRKGD SLNVQVRQSA KLNAKFTPYG LTSGSNGSVN STPLDVSKFA GISDSQFRDL
      361 VSAQNDTVSF DKMVSEFFDN GKVWNVVKGD DGNTYTFDKT ATMRAFNDKL NQFNNNSNYY
      421 NNEQSNNNSS YRDRAYTFET AFNNGSLPVY YTKDTSNNTS SVFNASHNDS TGRVIVNAFG
      481 SNQTPQKDSL VASVLKSANT AKDNGQSVAD FASQYAKANT NDALNNAFVV NPVSDSDKNI
      541 NSYAFGLLKQ EIAKQNLTNY NTGKDSKPSQ VSEIQSILDA RLDKNNFTLL DKQSEDNETV
      601 GTDFETLGHM LSNNASAANI ATAFKNAKTL NDNTKGLYVQ SVQGLLQDAV AASDGTNQQG
      661 NVKFQGNGSD LTVAKINALL SEVK
//