LOCUS UQS84675.1 1136 aa PRT BCT 19-SEP-2022 DEFINITION Apilactobacillus apisilvae hypothetical protein protein. ACCESSION CP093362-1007 PROTEIN_ID UQS84675.1 SOURCE Apilactobacillus apisilvae ORGANISM Apilactobacillus apisilvae Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Apilactobacillus. REFERENCE 1 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1469670) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 11482x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:52:50 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,575 CDSs (total) :: 1,494 Genes (coding) :: 1,480 CDSs (with protein) :: 1,480 Genes (RNA) :: 81 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 5 of 14 Pseudo Genes (incomplete) :: 11 of 14 Pseudo Genes (internal stop) :: 1 of 14 Pseudo Genes (multiple problems) :: 3 of 14 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Apilactobacillus apisilvae" /mol_type="genomic DNA" /strain="SG5_A10" /isolation_source="Bee" /host="Austroplebeia australis" /type_material="type strain of Apilactobacillus apisilvae" /db_xref="taxon:2923364" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-04-30" protein /locus_tag="MOO46_05345" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /transl_table=11 BEGIN 1 MKKILEICIP IMLIFIGILI FNNNVVKADI NSSQPFQSWN NGLSGYSYKN PVLNDGWKEP 61 SDINTDTSLC NRTDYNSNNK ISAIYKGTTA YVYDYEGFYN AIFKQGYGNG IDGHNDSSGV 121 VSNIHKVVLE NDINLDGTSG SKINGFGSSD YTANYAEHDK LVIDGYSNGN YHTLDMSKGD 181 ISIEALTSSE DWTIENMKIL GYSYFGPISS YTPNGGTTLN YRNIDYYGAQ LSWGSRQNNC 241 KINIYGNVSV HSLDYYKDSS GQSQISEGQN QQNLQTGDIE FHKNSNYYGE TYDGNCLELE 301 GSCKIDNNVN IDLHPHGTYA EDAWFNSYGL YLYPGGNYKP EINFGSNDKF NIYCDSNNLT 361 DSDGSSRIPE DPYNISIAIY ANASSSVPAN MYMNNGTNSK FNIYSNGQVK SQAALVYFSY 421 VNANVSGVGN EFNVSSDANN SYIPSNGVVE FNGSGNNINV DNLGSFKLNI KNIPQTSTSN 481 YQINSDSSTN INLDRPTDVE ISNKTYNSNQ NNHMFYSGTS NVSNNGYIYA RNTRVTGWLG 541 DNQTPSIDNQ LVKSLFLPLR SDSSYGKSTI FVGGVRLYGS YFEVSDMVTK LDRQLVDSKS 601 SDVYLKAQAK NYNSIKFTAS PMATISYTNY NDYNKNNNKV TGKVIDDNGN PLKNSYINIS 661 LDNDKGKFID PDTRPVNKNY NQYIASNEVL FSPVKQYMPS TSASTIIQDN GNTSNFYNNI 721 AGTIGSTDGQ FGLAHDYFYN RYNMGDANTL NQDITLYSRD GTTINKDSSK DEFYSGNVGD 781 QGLQVGMEHY VAITDNNGNF SFNIPNVLWN EINNNNNNHK LNITPYYNFS PGNTKTVNLA 841 YNPKLNINNK IKDITYSNAD SSDGFSLSKV FQGGQGYSSQ GDTLEFDSTI NNTSDNSDIS 901 VNSSATYDQP LPNNIDVSTL KVSYDNNDFN VIHEPNVIKS NNGVKILKIP IKNLKSNSTL 961 NLKVRGTLKN DNATVDNSDI RIKPKYNIDS TEYSGEADNV NEINFSDNQL NFTPISNIDY 1021 DYSSIVKDSL LLPTNSSTPV MSNVKNNMRG NSYADIQVQQ PSEEFKDNSS SEIKGDLIYN 1081 GQNLNQSPVM LFSTDGNDNM YISNSTPLYL KPLQNYEGEG NDFYTLLNWS VTYGIN //