LOCUS       UQS82897.1               806 aa    PRT              BCT 19-SEP-2022
DEFINITION  Bombilactobacillus folatiphilus DNA topoisomerase IV subunit
            A protein.
ACCESSION   CP093366-853
PROTEIN_ID  UQS82897.1
SOURCE      Bombilactobacillus folatiphilus
  ORGANISM  Bombilactobacillus folatiphilus
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Bombilactobacillus.
REFERENCE   1  (bases 1 to 1622785)
  AUTHORS   Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
            and Jiranek,V.
  TITLE     Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
            sp. nov., Bombilactobacillus folatiphilus sp. nov. and
            Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
            bacterial isolates from stingless bees Tetragonula carbonaria and
            Austroplebeia australis
  JOURNAL   Int J Syst Evol Microbiol 72 (9) (2022)
   PUBMED   36094463
REFERENCE   2  (bases 1 to 1622785)
  AUTHORS   Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
            Jiranek,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
            PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2020
            Assembly Method        :: Smrtlink v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7404x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/14/2022 11:45:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,623
            CDSs (total)                      :: 1,550
            Genes (coding)                    :: 1,527
            CDSs (with protein)               :: 1,527
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 12 of 23
            Pseudo Genes (incomplete)         :: 9 of 23
            Pseudo Genes (internal stop)      :: 10 of 23
            Pseudo Genes (multiple problems)  :: 7 of 23
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Bombilactobacillus folatiphilus"
                     /mol_type="genomic DNA"
                     /strain="SG4_D2"
                     /isolation_source="Bee"
                     /host="Tetragonula carbonaria"
                     /type_material="type strain of Bombilactobacillus
                     folatiphilus"
                     /db_xref="taxon:2923362"
                     /country="Australia: Brisbane"
                     /lat_lon="27.4810 S 153.0121 E"
                     /collection_date="2020-03-20"
     protein         /gene="parC"
                     /locus_tag="MOO45_04495"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011374677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology. GO_component:
                     GO:0009340 - DNA topoisomerase IV complex [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA]; GO_process: GO:0006260 - DNA replication [Evidence
                     IEA]; GO_process: GO:0006265 - DNA topological change
                     [Evidence IEA]"
                     /transl_table=11
BEGIN
        1 MDDRFGRYSK YIIQERALPD VRDGLKPVQR RILYAMNIDG NTYDKAFKKA AKSVGNVMGN
       61 FHPHGDSSIY EALVRLSQNW KLRVPLIEMH GNNGSMDGDP PAAMRYTEAR LSKISQKMLQ
      121 DIDKNTVDMV LNFDDTQEEP TVLPARFPNL LVNGATGISA GYATEIPPHN LGEVIDATVA
      181 LLDNPDLTLD EAMQYVKGPD FPTGGILQGV AGIKKAYETG RGKVILQSKT QISELHGHRS
      241 QIVVTEIPYE VNKAQLVKKL DEVRVLKKVE GIAEVRDESD RHGLSIVIEL KREVDAQGVL
      301 NYLFMNTDLQ VTYNFNMVAI AQMRPQQMGL LPILKAYVAH QKEVVLRRTK FDLNKAQQRL
      361 HIVDGLIKAL SILDQVIKTI RASQNKRDAQ QNLMKIYDFS EAQANAIVAL QLYRLTNTDV
      421 TSLQAEQARL EKIIQQYRTI IDKPEALLKV IKDELMATKQ EFSTPRLTKI EAQVKELKID
      481 RSVMIGNETV RILVSKQGYL KRSSLRSYQA SVGKDNGLQT SDEVILDQEA STLEHLWMFT
      541 NYGHLIYRPI HELADVRWKD TGQHLSQTYA LKSDETILKA FVFQDLQQQQ NFVLATNDNY
      601 IKQVNFQDLL PGRTYRTRLV QAIKLHDQAS RVLDIYCLNA TDSQPKEVIA WSKNTYALRF
      661 DLTEVPLVKA KATGVKLMDL KTDDQVVNFC IHDLADQQSY IGILTQRGAV KKMRMSEIPS
      721 TTRSRRGILV LRKLKKDSHF IKFVSLFSKN DILKVETKNN YWKQINLADF SFGDRYSNGS
      781 FVIDIEKNGP IILAKKVNQP ESGEIS
//