LOCUS UQS82338.1 693 aa PRT BCT 19-SEP-2022
DEFINITION Bombilactobacillus folatiphilus ATP-dependent zinc metalloprotease
FtsH protein.
ACCESSION CP093366-240
PROTEIN_ID UQS82338.1
SOURCE Bombilactobacillus folatiphilus
ORGANISM Bombilactobacillus folatiphilus
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
Bombilactobacillus.
REFERENCE 1 (bases 1 to 1622785)
AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S.
and Jiranek,V.
TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov.
sp. nov., Bombilactobacillus folatiphilus sp. nov. and
Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid
bacterial isolates from stingless bees Tetragonula carbonaria and
Austroplebeia australis
JOURNAL Int J Syst Evol Microbiol 72 (9) (2022)
PUBMED 36094463
REFERENCE 2 (bases 1 to 1622785)
AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and
Jiranek,V.
TITLE Direct Submission
JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide,
PMB 1, Glen Osmond, South Australia 5064, Australia
COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: NOV-2020
Assembly Method :: Smrtlink v. 9.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 7404x
Sequencing Technology :: PacBio Sequel II
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 03/14/2022 11:45:56
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 1,623
CDSs (total) :: 1,550
Genes (coding) :: 1,527
CDSs (with protein) :: 1,527
Genes (RNA) :: 73
rRNAs :: 4, 4, 4 (5S, 16S, 23S)
complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)
tRNAs :: 58
ncRNAs :: 3
Pseudo Genes (total) :: 23
CDSs (without protein) :: 23
Pseudo Genes (ambiguous residues) :: 0 of 23
Pseudo Genes (frameshifted) :: 12 of 23
Pseudo Genes (incomplete) :: 9 of 23
Pseudo Genes (internal stop) :: 10 of 23
Pseudo Genes (multiple problems) :: 7 of 23
CRISPR Arrays :: 3
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Bombilactobacillus folatiphilus"
/mol_type="genomic DNA"
/strain="SG4_D2"
/isolation_source="Bee"
/host="Tetragonula carbonaria"
/type_material="type strain of Bombilactobacillus
folatiphilus"
/db_xref="taxon:2923362"
/country="Australia: Brisbane"
/lat_lon="27.4810 S 153.0121 E"
/collection_date="2020-03-20"
protein /gene="ftsH"
/locus_tag="MOO45_01200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010018499.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology. GO_function:
GO:0004222 - metalloendopeptidase activity [Evidence IEA];
GO_function: GO:0016887 - ATP hydrolysis activity
[Evidence IEA]; GO_process: GO:0006508 - proteolysis
[Evidence IEA]; GO_process: GO:0051301 - cell division
[Evidence IEA]"
/transl_table=11
BEGIN
1 MKNNRNGLRN NSLFYIIIFI LLILATSWFV GGQGSSQVEN LSSSEFVAKL KAKKIKNFSL
61 QPSNGVYKVS GDFKKAESSK SHSNGVNLFA HSAATVNRSK SFSATVLPNN STLKEINQAA
121 QKTKTKVNTH EESQNGMWLN IALTVIPFLF FAFLLYSMMG QAGQGGGGAG KIMSFGKSQT
181 KPVDPKKNKV RFSDVAGAEE EKQELVEVVD FLKDPRKYLA LGARIPSGVL LEGPPGTGKT
241 LLARAVAGEA GVPFYSISGS DFVEMFVGVG ASRVRDLFNS AKKSAPAIIF IDEIDAIGRQ
301 RGNGKTGGGN DEREQTLNQL LVEMDGFTGK EGLIVIAATN RSDVLDPALL RPGRFDRKIL
361 VGRPDVKGRE AILKVHAKNK PLADDVDLKV IAQQTPGFVG ADLENVLNEA ALVAAERNKT
421 KIDATDIDEA EDRVIAGPAK KDRVISAKER ETVAYHEAGH AIIGVVLSDS RVVRKVTIIP
481 RGRAGGYAIM LPKEDQNLLT KKDLMEQVAG LMGGRTAEEI IFGVQSSGAS NDFEQATQIA
541 RSMVTEYGMT KRLGMVQLEK GGAPVGAYGQ ANYSQETATA IDEEIRKILD EGHQTAIDVI
601 QSHREQHKAI AQALLKYETL DEKQILSLYN TGKMPASAQD EFPSEKASTF EEAKQAAQKR
661 DEAKQAEELS KKNDSDQQMT TDPTDSNDDQ TEE
//