LOCUS UQS82135.1 633 aa PRT BCT 19-SEP-2022 DEFINITION Bombilactobacillus folatiphilus tRNA uridine-5-carboxymethylaminomet hyl(34) synthesis enzyme MnmG protein. ACCESSION CP093366-16 PROTEIN_ID UQS82135.1 SOURCE Bombilactobacillus folatiphilus ORGANISM Bombilactobacillus folatiphilus Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Bombilactobacillus. REFERENCE 1 (bases 1 to 1622785) AUTHORS Oliphant,S.A., Watson-Haigh,N.S., Sumby,K.M., Gardner,J., Groom,S. and Jiranek,V. TITLE Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis JOURNAL Int J Syst Evol Microbiol 72 (9) (2022) PUBMED 36094463 REFERENCE 2 (bases 1 to 1622785) AUTHORS Oliphant,S.A., Sumby,K.M., Gardner,J.M., Watson-Haigh,N.S. and Jiranek,V. TITLE Direct Submission JOURNAL Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia COMMENT The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: NOV-2020 Assembly Method :: Smrtlink v. 9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 7404x Sequencing Technology :: PacBio Sequel II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 03/14/2022 11:45:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,623 CDSs (total) :: 1,550 Genes (coding) :: 1,527 CDSs (with protein) :: 1,527 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 3 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 12 of 23 Pseudo Genes (incomplete) :: 9 of 23 Pseudo Genes (internal stop) :: 10 of 23 Pseudo Genes (multiple problems) :: 7 of 23 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Bombilactobacillus folatiphilus" /mol_type="genomic DNA" /strain="SG4_D2" /isolation_source="Bee" /host="Tetragonula carbonaria" /type_material="type strain of Bombilactobacillus folatiphilus" /db_xref="taxon:2923362" /country="Australia: Brisbane" /lat_lon="27.4810 S 153.0121 E" /collection_date="2020-03-20" protein /gene="mnmG" /locus_tag="MOO45_00080" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003600277.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology. GO_function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO_process: GO:0002098 - tRNA wobble uridine modification [Evidence IEA]; GO_process: GO:0008033 - tRNA processing [Evidence IEA]" /transl_table=11 BEGIN 1 MKEYEAAKKY DVIVVGAGHA GCEAALAAAR MGQETLLLTL NLDMIAFMPC NPSIGGPAKG 61 VVVREIDALG GQMGRAIDAT YLQMRMLNTG KGPAVRALRA QADKNEYHEH MKETLETTPH 121 LTLRQGLVDR LLVKDQICYG VVTSTGARYQ AQSVVLTAGT SSRGKIIIGE LMYSSGPNNS 181 LPSIKLSEDL ERHGLKLQRF KTGTPPRVAK NSVDFSQMEE QPGDKTPRSF SYLTPRSAYL 241 KDQISCWMTY TNEQTHQIIR DNLDRAPMFS GVIEGVGPRY CPSIEDKVVR FADKPRHQIF 301 MEPEGRTTQE YYVGDFSTSM PEEVQQKMLR SVAGLEHARM MRPGYAIEYD IVEPWQLKQS 361 LETKTIKHLY TAGQMNGTSG YEEAAGQGLM AGINAALDAQ NKAPLILGRN EAYIGVMIDD 421 LVTKGTNEPY RLLTSRAEYR LILRHDNADE RLSEKGYQLG LISEARHQAF VKKYQQVAAE 481 ITRLQQTRIK PHEAVNQFLV DLGMKPLKDG VLASDFLKRP EVNYETAVRF IEPAPEELAP 541 EVTEQVEISL KYAGYIKKEE AQIAHLQKLE AKKIPENLDY DDVYGLATEA RQKLQQINPT 601 TIAQAGRISG VNPADLSILM VYIQRGRIAK VDE //