LOCUS       UJP41125.1               735 aa    PRT              BCT 25-JAN-2022
DEFINITION  Cellulomonas palmilytica right-handed parallel beta-helix
            repeat-containing protein protein.
ACCESSION   CP062221-1313
PROTEIN_ID  UJP41125.1
SOURCE      Cellulomonas palmilytica
  ORGANISM  Cellulomonas palmilytica
            Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
            Cellulomonas.
REFERENCE   1  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Cellulomonas coenopalmateriei, sp. nov., a novel species of genus
            Cellulomonas for degradation of raw lignocellulose biomass; oil
            palm empty fruit bunch
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2020) Pilot Plant Development and Training
            Institute, King Mongkut's University of Technology Thonburi,
            Bangkuntien-Chaitalay, Bangkok 10150, Thailand
COMMENT     Bacteria and source DNA available from Enzyme Technology
            Laboratory, Pilot Plant Development and Training Institute, King
            Mongkut's University of Technology Thonburi.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAY-2020
            Assembly Method        :: unicycler v. v0.4.8
            Assembly Name          :: EW123_hybrid
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/30/2020 19:03:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.13
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,454
            CDSs (total)                      :: 3,400
            Genes (coding)                    :: 3,351
            CDSs (with protein)               :: 3,351
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 8 of 49
            Pseudo Genes (incomplete)         :: 41 of 49
            Pseudo Genes (internal stop)      :: 2 of 49
            Pseudo Genes (multiple problems)  :: 2 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Cellulomonas palmilytica"
                     /mol_type="genomic DNA"
                     /strain="EW123"
                     /isolation_source="Earthworm bio-fertilizer soil"
                     /type_material="type strain of Cellulomonas palmilytica"
                     /db_xref="taxon:2608402"
                     /country="Thailand: Bangkok"
                     /lat_lon="13.6771 N 100.4591 E"
                     /collection_date="Nov-2015"
                     /collected_by="Enzyme Technology Laboratory, KMUTT"
     protein         /locus_tag="F1D97_06665"
                     /inference="COORDINATES: protein motif:HMM:NF024627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPGRHTAPPG ARTTALDSPR RRQLVAVAAM ACAAVVLATT IATQASSADT AVHRPADPLR
       61 VLKGTTLAAG ASTTVTLPSV PSGTTAAELH VSVKPSKTNA TVRVCPGTAS TCSNPRTVTA
      121 AGGFANGSVL VAPSSGKVTL TALDGAKVWA DVRGWSLRST KTDARDSRYL PVEPRRAGTV
      181 SLTSKKTRTV SLSGVPKNAT GAVVRLTSAA GATATNIGAC ATGSSPTCNG TTFLNPSTSR
      241 AAQASGVVAL GGDGSQVNLY ATGGSADVSI DIDGFYVAAS TLPDGGLLAP ASGSLDARVI
      301 SPGSSSTLTL SPPSGATAVH LRVRVSGAWR ETVVAACPGT SATARCRSTS LVTASSSAPT
      361 YGDAVIPLGG SGGKSVTLTN TAASVKVAPE VLGWVVGGKT VTVAPTSATT SATTKATATA
      421 TAKATATATA TAKATATATP KPTATATAKP TSSPSPTSSP RATTAPTTPA PSPSASTGTG
      481 GKPGPSNTGV PSGVSLKVHD GDLVIKEDGA VISGLDIRGF VDVRASNVTI KNSIIRGYKV
      541 STGRSLVQNT NGAPLLIQDS ELFAASPSYW IDGVRGANIT MRRVDVHDVI DSVRITGDDV
      601 RVEASWLHDN LHYASAPYQE DGTHDDNIQI QRGSDIVITG NTIEGAYNAA IMYSPGLGVV
      661 SDVTVSGNWI DGGGCSVNIA EQGRGPIQGL VFSKNTFGLD TRVDRCAIIS PSTTVPKVSS
      721 NYYEDGKTVA VRQGG
//