LOCUS UJP40881.1 1308 aa PRT BCT 25-JAN-2022
DEFINITION Cellulomonas palmilytica S8 family serine peptidase protein.
ACCESSION CP062221-1031
PROTEIN_ID UJP40881.1
SOURCE Cellulomonas palmilytica
ORGANISM Cellulomonas palmilytica
Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
Cellulomonas.
REFERENCE 1 (bases 1 to 3834012)
AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
TITLE Cellulomonas coenopalmateriei, sp. nov., a novel species of genus
Cellulomonas for degradation of raw lignocellulose biomass; oil
palm empty fruit bunch
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3834012)
AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2020) Pilot Plant Development and Training
Institute, King Mongkut's University of Technology Thonburi,
Bangkuntien-Chaitalay, Bangkok 10150, Thailand
COMMENT Bacteria and source DNA available from Enzyme Technology
Laboratory, Pilot Plant Development and Training Institute, King
Mongkut's University of Technology Thonburi.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Date :: 19-MAY-2020
Assembly Method :: unicycler v. v0.4.8
Assembly Name :: EW123_hybrid
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 10.0x
Sequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 09/30/2020 19:03:08
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 4.13
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,454
CDSs (total) :: 3,400
Genes (coding) :: 3,351
CDSs (with protein) :: 3,351
Genes (RNA) :: 54
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 45
ncRNAs :: 3
Pseudo Genes (total) :: 49
CDSs (without protein) :: 49
Pseudo Genes (ambiguous residues) :: 0 of 49
Pseudo Genes (frameshifted) :: 8 of 49
Pseudo Genes (incomplete) :: 41 of 49
Pseudo Genes (internal stop) :: 2 of 49
Pseudo Genes (multiple problems) :: 2 of 49
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Cellulomonas palmilytica"
/mol_type="genomic DNA"
/strain="EW123"
/isolation_source="Earthworm bio-fertilizer soil"
/type_material="type strain of Cellulomonas palmilytica"
/db_xref="taxon:2608402"
/country="Thailand: Bangkok"
/lat_lon="13.6771 N 100.4591 E"
/collection_date="Nov-2015"
/collected_by="Enzyme Technology Laboratory, KMUTT"
protein /locus_tag="F1D97_05235"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013769708.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MSRPPARRST LAAATALSVA LTTGVLATSA TAAPPGPPSP ADHRIDPSRV DRTLAEARKA
61 VGITGATGQI TALVTLDTPA GVDVAAQGKD AVQDAAAQTE AVAEAVVPTE LTTKNARSAT
121 PKRVGTLTNL VAGTLVSGDA AKIRALASKD EVTAIYRVME KRPTNSSTVA FTKALQAWQD
181 TGQTGAGISL AVIDTGLDYT HASFGGAGTV EAYEEAYGED GTQPVDPAWF DAAKFAGGYD
241 FAGPLYDASL DEPGSTDVPT PDENPIDALS TSSNSGHGTH VAGTAAGYGV DATGATFRGD
301 YTSLTDVSDW EVGPGSAPGA LLWSFKVFGD IGGSTDLTSL ALDRAADPNG DGDLSDRVDV
361 VNMSLGGDGA PADDPDSLLV TELTKLGVLV TNSAGNAGDI TDIGGAPGNS PSALTVANSV
421 ATPALDAVKV TAASDDALEG DLLPAQNSVA YGGPDVEAPV AYVGATFDGC TAFTAAQAAA
481 VAGKIAYLWW DDDDTSRRCG SAARFNNATA AGAVGVVLPT ELTVFSAGIA GNATIPGAQL
541 TKQSTDTLLP EIQAGTLTLE IGPGLALSSR LDGAQDLLND GSSRGVHGSL GVVKPDVAAP
601 GTGILSAASG GGTAGHVLSG TSMAAPHVAG IAALVRAAHP RWSPTEVKAA IVNTATHDVT
661 TEPDGGGLAY GPERVGAGRV DALAAVETDV VAYNAKNPAL TSVTFGVVDV GPTKVTRTAT
721 VTVRNFGRTT QSYDASFAAA STTGGATVSV SPKRVTVPRG GKATVTLTLS VDPATLERDI
781 DPTSSLEQGG LPREYVAALT GRLVLDSRSG DDELRVPVQA APRIVSDLKA KDVTFTGSAD
841 TAGLALRGRG VASGGWQSLT TPLILGATSP RLPNEATLGT SRSAVRSGDL RYVGWSSTAP
901 YVEALGADPQ DDGLLNVGIA TEGNWASLGL AVYPVIDIDV DGDGTFDLES IVWKLDEAID
961 LTVVTTYDLN APASAPAVDI EPINYEFGDV DTGVFDSNVL VAPISLGATG IAPGDTPTIS
1021 VWTYSPYGGD DSVVDEADVF TTDPYDPPFW FENDRASLVS TDGADGVSIP VHRSADATSG
1081 DLLVFQHHNR DGKRVQVVDV TVPTSTTTTL AVSGGTSYGS KARLTATVAP ATARGSVAFR
1141 DGTKLLAVQK VHRGKATASV ALGIGEHSLT ASFVPDRGSS YLASTSAPVS LTVGKSATTT
1201 SVKVDGFGGA SRSATLPSGG KGGPSGPGGP LTAVVTVVGA TAAPSGTVTL SEGGTKLGTA
1261 KLSARGLTGT AKVTVRDLAP GKHTLTATYP GSATTEASTG AVTVTVRR
//