LOCUS UJP39605.1 430 aa PRT BCT 25-JAN-2022 DEFINITION Cellulomonas palmilytica extracellular solute-binding protein protein. ACCESSION CP062221-2957 PROTEIN_ID UJP39605.1 SOURCE Cellulomonas palmilytica ORGANISM Cellulomonas palmilytica Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas. REFERENCE 1 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Cellulomonas coenopalmateriei, sp. nov., a novel species of genus Cellulomonas for degradation of raw lignocellulose biomass; oil palm empty fruit bunch JOURNAL Unpublished REFERENCE 2 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Direct Submission JOURNAL Submitted (16-SEP-2020) Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkuntien-Chaitalay, Bangkok 10150, Thailand COMMENT Bacteria and source DNA available from Enzyme Technology Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAY-2020 Assembly Method :: unicycler v. v0.4.8 Assembly Name :: EW123_hybrid Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 10.0x Sequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/30/2020 19:03:08 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.13 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,454 CDSs (total) :: 3,400 Genes (coding) :: 3,351 CDSs (with protein) :: 3,351 Genes (RNA) :: 54 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 8 of 49 Pseudo Genes (incomplete) :: 41 of 49 Pseudo Genes (internal stop) :: 2 of 49 Pseudo Genes (multiple problems) :: 2 of 49 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Cellulomonas palmilytica" /mol_type="genomic DNA" /strain="EW123" /isolation_source="Earthworm bio-fertilizer soil" /type_material="type strain of Cellulomonas palmilytica" /db_xref="taxon:2608402" /country="Thailand: Bangkok" /lat_lon="13.6771 N 100.4591 E" /collection_date="Nov-2015" /collected_by="Enzyme Technology Laboratory, KMUTT" protein /locus_tag="F1D97_15035" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013839526.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRPPGTRRWR RTAAAVVVAT AVATTGACAS DGSGDGVTTL NFFQFKGEAL EDFDAIIAAF 61 EDENPDIRVV QNQVADADTI IRTLLVKGKA PDVITLNANG NFGRLAEAGV FHDFRGDPVL 121 DTINPAVQTI LTDLGTSGDE VNGLAYVNNA NGVIYNAEIF EEQGLEVPTT WDELVAVCDA 181 LQEAGITPFY GTLADAWTTL PSFNGLGAYA AQDGFFDDLR AQGEDVGPDS PVSFEKDFAD 241 VLERQAQLFG YMQEGYRGRT YDDGNAAFAS GDAAMLLQGI WALSPIKQAN PDLRAEIFPY 301 PSDAPDDRLL VSGVDVAVTV PKDGAHHEEA MRFVEFLFET RVVEEFAASQ NMVPSVEGAQ 361 LSDDPALQSV KPYFDDGRLA GFVDHQIPPS IPLAAIDQQF LFDGDARSAL ATLDNEWRKV 421 AARTIPVTED //