LOCUS UJP39533.1 741 aa PRT BCT 25-JAN-2022 DEFINITION Cellulomonas palmilytica SpoIID/LytB domain-containing protein protein. ACCESSION CP062221-2874 PROTEIN_ID UJP39533.1 SOURCE Cellulomonas palmilytica ORGANISM Cellulomonas palmilytica Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas. REFERENCE 1 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Cellulomonas coenopalmateriei, sp. nov., a novel species of genus Cellulomonas for degradation of raw lignocellulose biomass; oil palm empty fruit bunch JOURNAL Unpublished REFERENCE 2 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Direct Submission JOURNAL Submitted (16-SEP-2020) Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkuntien-Chaitalay, Bangkok 10150, Thailand COMMENT Bacteria and source DNA available from Enzyme Technology Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAY-2020 Assembly Method :: unicycler v. v0.4.8 Assembly Name :: EW123_hybrid Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 10.0x Sequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/30/2020 19:03:08 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.13 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,454 CDSs (total) :: 3,400 Genes (coding) :: 3,351 CDSs (with protein) :: 3,351 Genes (RNA) :: 54 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 8 of 49 Pseudo Genes (incomplete) :: 41 of 49 Pseudo Genes (internal stop) :: 2 of 49 Pseudo Genes (multiple problems) :: 2 of 49 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Cellulomonas palmilytica" /mol_type="genomic DNA" /strain="EW123" /isolation_source="Earthworm bio-fertilizer soil" /type_material="type strain of Cellulomonas palmilytica" /db_xref="taxon:2608402" /country="Thailand: Bangkok" /lat_lon="13.6771 N 100.4591 E" /collection_date="Nov-2015" /collected_by="Enzyme Technology Laboratory, KMUTT" protein /locus_tag="F1D97_14615" /inference="COORDINATES: protein motif:HMM:NF016047.1,HMM:TIGR02669.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRRILLPVVA ALVAGALVAT PAAAMDTPVA PTASGPTERA AASVVLPAAA PASFTVHGSG 61 WGHGLGMSQY GAYGMALDGR SATNILEHYY APAKVTTRTD DPTIRVQVRS GVTSVTVSRE 121 SGTTWTLGTA PGTTVSVAAS SITFTYSTAS GTARVSTTID GTQYRTNPST WPELTLTWKN 181 GVVTVPGANG GTGSVRYKRG SLAFGPLSGG VNTVSVVKLN SEYLYGIAEM PSSWPASALQ 241 AQAIAARTYA YRKYQAGVRS SIDAHITDET TDQKYTAYNK EAEAGYGKYW VAAVDATRTS 301 GKARVIQAPD GKLAETYYSS STGGKTTNSE DVWGSATIAY LRSRDDHWSV DPRVKNPYAS 361 WTTTITQAQM KAKFPRLSDV ARLEVSQRAS SGAVMQLKAT SSAGSVQYLL AKPTTDGVRT 421 TLGSRLGIMS AYFSLDTPPA PDPRSDVERL SGDDRFATAA AIGRAAFPAG GTVVIVSGQQ 481 ASLVDGLVAA PYARSIKAPV LLSTRTAVPP ASMAEITRRG ATKAVLVGGT GVLTTDVSAQ 541 LRAAGLSVTR LSGADRYATA AAVARAFGSA SSVVVASGVT ANLVDAAAAG GPAAASGQPV 601 LLVPRSSVPA GTRDTIKALG ARSATVVGGT GVVTTDVTDV LRADGLKLAR LSGADRYATA 661 AAVATAYEGS VKAGTVVLAS GLDANLVDSL TGGVLGRLTL LTAGAGVPAV TDRWFAAREV 721 SLLQVLGGTG AVPDSAVEAV R //