LOCUS       UJP39425.1               974 aa    PRT              BCT 25-JAN-2022
DEFINITION  Cellulomonas palmilytica leucine--tRNA ligase protein.
ACCESSION   CP062221-2752
PROTEIN_ID  UJP39425.1
SOURCE      Cellulomonas palmilytica
  ORGANISM  Cellulomonas palmilytica
            Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae;
            Cellulomonas.
REFERENCE   1  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Cellulomonas coenopalmateriei, sp. nov., a novel species of genus
            Cellulomonas for degradation of raw lignocellulose biomass; oil
            palm empty fruit bunch
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3834012)
  AUTHORS   Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R.,
            Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2020) Pilot Plant Development and Training
            Institute, King Mongkut's University of Technology Thonburi,
            Bangkuntien-Chaitalay, Bangkok 10150, Thailand
COMMENT     Bacteria and source DNA available from Enzyme Technology
            Laboratory, Pilot Plant Development and Training Institute, King
            Mongkut's University of Technology Thonburi.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-MAY-2020
            Assembly Method        :: unicycler v. v0.4.8
            Assembly Name          :: EW123_hybrid
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/30/2020 19:03:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.13
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,454
            CDSs (total)                      :: 3,400
            Genes (coding)                    :: 3,351
            CDSs (with protein)               :: 3,351
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 8 of 49
            Pseudo Genes (incomplete)         :: 41 of 49
            Pseudo Genes (internal stop)      :: 2 of 49
            Pseudo Genes (multiple problems)  :: 2 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Cellulomonas palmilytica"
                     /mol_type="genomic DNA"
                     /strain="EW123"
                     /isolation_source="Earthworm bio-fertilizer soil"
                     /type_material="type strain of Cellulomonas palmilytica"
                     /db_xref="taxon:2608402"
                     /country="Thailand: Bangkok"
                     /lat_lon="13.6771 N 100.4591 E"
                     /collection_date="Nov-2015"
                     /collected_by="Enzyme Technology Laboratory, KMUTT"
     protein         /locus_tag="F1D97_13990"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013883249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTTTPAQSPD PSVESRDDVP FRYTADLAQQ IELRWQDEWQ ERGTFFAANP TGHLTDGDGR
       61 HADPSKRTFF VMDMFPYPSG AGLHIGHPLG YIATDVVARF RRMQGDNVLH ALGFDAFGLP
      121 AEQYAVQTGQ HPRVTTEANI AIMQRQLRRL GLAHDPRRSF ATIDPEYVRW TQWIFLQIFG
      181 AWYDEDAVRP DGGRGKARPI EELEAELADG TRPVPVVDGV REGVAWADLD VVERRRVLDS
      241 RRLAYVSETP VNWCPGLGTV LANEEVTSEG RSERGNFPVF QRSLRQWNMR ITAYADRLTD
      301 DLEHIDWPDK VKSMQRNWIG RSSGAHVTFA VEGGQEVTVF TTRPDTLFGA TFMVVAPEHP
      361 LLDEVPAAWP DGTRDAWTGG HPTPAAAVAA YRAEAAAKTA VERQADAGRK TGVFTGHLAA
      421 NPVNGELLPV FTADYVLMGY GTGAIMAVPG GDSRDHAFAQ AFDLPIVYTI DGEETDAART
      481 GDGAVINSAN DEISLDGLDV ATAKERITAW LEAKGVGAGT VTYRLRDWLF SRQRYWGEPF
      541 PIVYDENDLP IALPSDALPV ALPDVPDYSP RTFDPDDADS SPEPPLGRNE DWVNVTLDLG
      601 DGPRTYRRDT NTMPNWAGSC WYYLRYLDPA SDDVLVDPVL EKFWLAPGHS GDAADSVGGV
      661 DLYVGGVEHA VLHLLYARFW HKVLFDLGHV SGAEPFHKLF NQGYIQAYAY TDERGVHVPA
      721 AEVVEDASSP TGFTWNGEPV NREYGKMGKS LKNMVTPDEM YAEYGADTLR VYEMSMGPLD
      781 LSRPWETRAV VGSQRFLQRL WRNVVSETDG SLVVTDDAPS DETLRVLHRT IADVTEDMAH
      841 MRINTAIAKL IVLNNHLTTL DAAPRAAVEP LVLMTAPIAP HIAEELWARL GHERSLALAP
      901 YPVADPAYLV EDTVTCVFQV QGKVRGRAEV SPQASDDDLR ALALQDAGVQ RALAGRDVRT
      961 VIVRAPKLVN VVPA
//