LOCUS UJP38869.1 516 aa PRT BCT 25-JAN-2022 DEFINITION Cellulomonas palmilytica ATP-dependent DNA ligase protein. ACCESSION CP062221-2120 PROTEIN_ID UJP38869.1 SOURCE Cellulomonas palmilytica ORGANISM Cellulomonas palmilytica Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas. REFERENCE 1 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Cellulomonas coenopalmateriei, sp. nov., a novel species of genus Cellulomonas for degradation of raw lignocellulose biomass; oil palm empty fruit bunch JOURNAL Unpublished REFERENCE 2 (bases 1 to 3834012) AUTHORS Siriatcharanon,A.-k., Sutheeworapong,S., Pason,P., Waeonukul,R., Kosugi,A., Ratanakhanokchai,K. and Tachaapaikoon,C. TITLE Direct Submission JOURNAL Submitted (16-SEP-2020) Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkuntien-Chaitalay, Bangkok 10150, Thailand COMMENT Bacteria and source DNA available from Enzyme Technology Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 19-MAY-2020 Assembly Method :: unicycler v. v0.4.8 Assembly Name :: EW123_hybrid Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 10.0x Sequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/30/2020 19:03:08 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 4.13 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,454 CDSs (total) :: 3,400 Genes (coding) :: 3,351 CDSs (with protein) :: 3,351 Genes (RNA) :: 54 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 8 of 49 Pseudo Genes (incomplete) :: 41 of 49 Pseudo Genes (internal stop) :: 2 of 49 Pseudo Genes (multiple problems) :: 2 of 49 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Cellulomonas palmilytica" /mol_type="genomic DNA" /strain="EW123" /isolation_source="Earthworm bio-fertilizer soil" /type_material="type strain of Cellulomonas palmilytica" /db_xref="taxon:2608402" /country="Thailand: Bangkok" /lat_lon="13.6771 N 100.4591 E" /collection_date="Nov-2015" /collected_by="Enzyme Technology Laboratory, KMUTT" protein /locus_tag="F1D97_10775" /EC_number="6.5.1.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_012725317.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MLLAEVADTS RALAATRSHL AKRALLVDLL RRTPPADVPI VAHYLGGELR QRRTGLGWRS 61 LAQLPEPATE PTLTLADVDA TFAQMAQLSG PGSTTQRQAL TARMFAAATA PEQELLRGLV 121 TGELRQGALD ALLLDAVAEA AGVPATTVRR AAMLAGATAP VASAALGAGG PDEAASVLAG 181 FGLTVGRAVR PMLAQSATDV ATALTDVGPG PAVVDAKLDG IRIQVHRHDD DVRVFTRSLD 241 DITARVPEIV DLVRTLPGGP LVLDGEALVV DDTGRPVAFQ DTAARAASGD AQVAAQYVLR 301 PFFFDVLHAD GDDLLDEPLH DRLAVLGRLL ADHPAASIDR VVTTDPDEAG THLRGVLAAG 361 HEGVVVKALD SPYEAGRRGG AWVKVKPRHT LDLVVLAVEW GSGRRRGLLS NIHLGARDGE 421 GGFVMLGKTF KGMTDEMLRW QTERFTELAT TPLDDWVVHV RPEQVVEIAF DGLQRSTRYP 481 GGLALRFARV VRYRDDKTPA EADTIDTVRA LATGAS //