LOCUS       SPC48686.1               663 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Rho-GAP domain-containing protein protein.
ACCESSION   BX284606-1177
PROTEIN_ID  SPC48686.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="rga-8"
                     /locus_tag="CELE_Y34B4A.8"
                     /standard_name="Y34B4A.8g"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A0A2K5AU32"
                     /db_xref="InterPro:IPR000198"
                     /db_xref="InterPro:IPR008936"
                     /db_xref="InterPro:IPR027267"
                     /db_xref="UniProtKB/TrEMBL:A0A2K5AU32"
                     /db_xref="WormBase:WBGene00021324"
     intron_pos      4:1 (1/13)
     intron_pos      21:2 (2/13)
     intron_pos      45:0 (3/13)
     intron_pos      74:0 (4/13)
     intron_pos      156:1 (5/13)
     intron_pos      208:0 (6/13)
     intron_pos      239:1 (7/13)
     intron_pos      307:0 (8/13)
     intron_pos      348:2 (9/13)
     intron_pos      391:2 (10/13)
     intron_pos      440:2 (11/13)
     intron_pos      521:0 (12/13)
     intron_pos      612:2 (13/13)
BEGIN
        1 MSFRKMEVGH RFRRIKHNLQ TYFRKKTTDE ELKLFENVML RNTKVSNFAS TFRKDLASSM
       61 TTGFKEENVD KRKKKVEELT MAQNLREASV DLDYFQTSCL HRVINAYGTV LHAEVDEKVK
      121 LEMAMERRVY EELAPFSEYE KNVNKLKDKL NLVSTDLEIA QKDLEKENSM THQESLDAIQ
      181 MKYEGMKDAL VTDIFASSVS KEFQLNEHML TSMNLKRDYF KKMYEMYEKA IPEVERMIAT
      241 ALPRPVFGVP LDEHLSIQKE RISGVLTKCC DFLRQNGMNE RGIFRVSGNA SKIKRIRAAL
      301 DAGQFDADEK HYNNDPHAVA STLKAYLREL PDPLTMDSLQ SDWVEAINLE GEERFSAIDR
      361 CLKKMTRGHR QNLIYLMKFL CDLEAKREET SMNASNLAIV FAPTMTGMIY DGMNTHGVKL
      421 TEFMISNGVR IFNFGALDKL DTSPPSGFTR AQSSISPRSF RPKEKAPPPP SQTPSTSGDL
      481 INLHSGDDDD FSDDQSPSPF NGGSLTRSHT EHRPNRPPPP SFRAACADTP KSRPISYNIA
      541 VGARPNESHS VSQPPKGMTV SMEDIIAEAP VAPERKRLSI LSLTGPPRVV PTPTQPSTSQ
      601 DVATVTDGGD NRTFVSVSGE SSSSSPTTSI SIPSNVQPPP QSAKPKPPLP VKPKDLSNET
      661 SRM
//