LOCUS       SPC48682.1               709 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Rho-GAP domain-containing protein protein.
ACCESSION   BX284606-1174
PROTEIN_ID  SPC48682.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="rga-8"
                     /locus_tag="CELE_Y34B4A.8"
                     /standard_name="Y34B4A.8c"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="GOA:A0A2K5AU23"
                     /db_xref="InterPro:IPR000198"
                     /db_xref="InterPro:IPR008936"
                     /db_xref="InterPro:IPR027267"
                     /db_xref="UniProtKB/TrEMBL:A0A2K5AU23"
                     /db_xref="WormBase:WBGene00021324"
     intron_pos      4:1 (1/15)
     intron_pos      27:1 (2/15)
     intron_pos      47:1 (3/15)
     intron_pos      64:2 (4/15)
     intron_pos      88:0 (5/15)
     intron_pos      117:0 (6/15)
     intron_pos      199:1 (7/15)
     intron_pos      251:0 (8/15)
     intron_pos      282:1 (9/15)
     intron_pos      350:0 (10/15)
     intron_pos      391:2 (11/15)
     intron_pos      434:2 (12/15)
     intron_pos      483:2 (13/15)
     intron_pos      564:0 (14/15)
     intron_pos      658:2 (15/15)
BEGIN
        1 MSSDIRGDYV VKTNGFLRKG SVTFGKRRNR TRDISEPRSL KERMSFRKME VGHRFRRIKH
       61 NLQTYFRKKT TDEELKLFEN VMLRNTKVSN FASTFRKDLA SSMTTGFKEE NVDKRKKKVE
      121 ELTMAQNLRE ASVDLDYFQT SCLHRVINAY GTVLHAEVDE KVKLEMAMER RVYEELAPFS
      181 EYEKNVNKLK DKLNLVSTDL EIAQKDLEKE NSMTHQESLD AIQMKYEGMK DALVTDIFAS
      241 SVSKEFQLNE HMLTSMNLKR DYFKKMYEMY EKAIPEVERM IATALPRPVF GVPLDEHLSI
      301 QKERISGVLT KCCDFLRQNG MNERGIFRVS GNASKIKRIR AALDAGQFDA DEKHYNNDPH
      361 AVASTLKAYL RELPDPLTMD SLQSDWVEAI NLEGEERFSA IDRCLKKMTR GHRQNLIYLM
      421 KFLCDLEAKR EETSMNASNL AIVFAPTMTG MIYDGMNTHG VKLTEFMISN GVRIFNFGAL
      481 DKLDTSPPSG FTRAQSSISP RSFRPKEKAP PPPSQTPSTS GDLINLHSGD DDDFSDDQSP
      541 SPFNGGSLTR SHTEHRPNRP PPPKFQSFRA ACADTPKSRP ISYNIAVGAR PNESHSVSQP
      601 PKGMTVSMED IIAEAPVAPE RKRLSILSLT GPPRVVPTPT QPSTSQDVAT VTDGGDNRTF
      661 VSVSGESSSS SPTTSISIPS NVQPPPQSAK PKPPLPVKPK DLSNETSRM
//