LOCUS SIU02530.1 573 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 esx conserved component ecca1. esx-1 type vii secretion system protein. protein. ACCESSION LT708304-3944 PROTEIN_ID SIU02530.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="ecca1" /locus_tag="BQ2027_MB3898" /note="Mb3898, -, len: 573 aa. Equivalent to Rv3868, len: 573 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 573 aa overlap). Member of the CBXX/CFQX family of hypothetical proteins; C-terminal end is highly similar to many e.g. P40118|CBXC_ALCEU|CBXXC|CFXXC CBXX PROTEIN (317 aa) FASTA scores: opt: 572, E(): 3e-24, (42.7% identity in 294 aa overlap); CAC48589 PROBABLE CBBX PROTEIN from Rhizobium meliloti (Sinorhizobium meliloti) plasmid pSymB (311 aa) FASTA scores: opt: 569, E(): 4.3e-24, (40.05% identity in 292 aa overlap); P95648|CBBX_RHOSH CBBX PROTEIN from Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides) (309 aa), FASTA scores: opt: 559, E(): 1.5e-23, (41.4% identity in 290 aa overlap); etc. Equivalent to O33089|Y2G8_MYCLE|ML0055|MLCB628.18c HYPOTHETICAL 62.3 KDA PROTEIN from Mycobacterium leprae (573 aa), FASTA scores: opt: 3330, E(): 3.9e-175, (89.2% identity in 573 aa overlap); and similar to Q9CD28|Y282_MYCLE|ML2537 HYPOTHETICAL 69.1 KDA PROTEIN from Mycobacterium leprae (640 aa), FASTA scores: opt: 943, E(): 2.4e-44, (37.5% identity in 571 aa overlap). Also similar to many proteins from Mycobacterium tuberculosis (strains H37Rv and CDC1551) e.g. O53687|Y282_MYCTU|Rv0282|MT0295|MTV035.10 HYPOTHETICAL 68.1 KDA PROTEIN (631 aa), FASTA scores: opt: 936, E(): 5.8e-44, (39.05% identity in 568 aa overlap). Contains PS00017 ATP/GTP-binding site motif A (P-loop). Protein product from Mb3898 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb3898 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y5H4" /db_xref="InterPro:IPR000641" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR003959" /db_xref="InterPro:IPR011990" /db_xref="InterPro:IPR023835" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR041627" /db_xref="UniProtKB/TrEMBL:A0A1R3Y5H4" BEGIN 1 MTDRLASLFE SAVSMLPMSE ARSLDLFTEI TNYDESACDA WIGRIRCGDT DRVTLFRAWY 61 SRRNFGQLSG SVQISMSTLN ARIAIGGLYG DITYPVTSPL AITMGFAACE AAQGNYADAM 121 EALEAAPVAG SEHLVAWMKA VVYGAAERWT DVIDQVKSAG KWPDKFLAGA AGVAHGVAAA 181 NLALFTEAER RLTEANDSPA GEACARAIAW YLAMARRSQG NESAAVALLE WLQTTHPEPK 241 VAVALKDPSY RLKTTTAEQI ASRADPWDPG SVVTDNSGRE RLLAEAQAEL DRQIGLTRVK 301 NQIERYRAAT LMARVRAAKG MKVAQPSKHM IFTGPPGTGK TTIARVVANI LAGLGVIAEP 361 KLVETSRKDF VAEYEGQSAV KTAKTIDQAL GGVLFIDEAY ALVQERDGRT DPFGQEALDT 421 LLARMENDRD RLVVIIAGYS SDIDRLLETN EGLRSRFATR IEFDTYSPEE LLEIANVIAA 481 ADDSALTAEA AENFLQAAKQ LEQRMLRGRR ALDVAGNGRY ARQLVEASEQ CRDMRLAQVL 541 DIDTLDEDRL REINGSDMAE AIAAVHAHLN MRE //