LOCUS SIU02502.1 342 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN protein. ACCESSION LT708304-3916 PROTEIN_ID SIU02502.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB3873C" /note="Mb3873c, -, len: 342 aa. Equivalent to Rv3843c, len: 342 aa, from Mycobacterium tuberculosis strain H37Rv, (99.4% identity in 342 aa overlap). Probable conserved transmembrane protein, equivalent to Q9CDC6|ML0073 PUTATIVE MEMBRANE PROTEIN from Mycobacterium leprae (344 aa), FASTA scores: opt: 1420, E(): 2.6e-68, (63.05% identity in 349 aa overlap). Protein product from Mb3873c detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb3873c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y5E4" /db_xref="InterPro:IPR025565" /db_xref="UniProtKB/TrEMBL:A0A1R3Y5E4" BEGIN 1 MIQVCSQCGT RWNVRERQRV WCPRCRGMLL APLADMPAEA RWRTPARPQV PTASDTRRTP 61 PRLPPGFRWI AVRPGAAPPP RHGPRLRGPT PHYAGIPRWG LTDHVDQAPV PASAKAGPSP 121 AAVRTTLLVS LLVFSIAVVV FVVRYVLLVI NRNTLLNSVV ASASVWLGVL VSLAAIAAAG 181 TTIVLLVRWL VARRAAAFMH QGLPERRSAR ELWAGCLLPM VNLLWAPLYV IELALVEDRY 241 TRLRRPIVVW WIVWIVSNAI SMFAFATSWV TDAQGIANNT TMMVLAYLCA AAAVAAAARV 301 FEGFEQKPVE RPAHRWVVVN TDGRSAPASS VAVELDGQEP AA //