LOCUS       SIU02455.1               593 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            ACYL-COA DEHYDROGENASE FADE35 protein.
ACCESSION   LT708304-3869
PROTEIN_ID  SIU02455.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="fadE35"
                     /locus_tag="BQ2027_MB3826"
                     /note="Mb3826, fadE35, len: 593 aa. Equivalent to Rv3797,
                     len: 593 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 593 aa overlap). Probable fadE35,
                     acyl-CoA dehydrogenase (EC 1.3.99.-), similar to many e.g.
                     Q9HY33|PA3593 from Pseudomonas aeruginosa (575 aa) FASTA
                     scores: opt: 838, E(): 2.1e-46, (35.3% identity in 569 aa
                     overlap); Q9ANZ8|AIDB from Burkholderia pseudomallei
                     (Pseudomonas pseudomallei) (554 aa), FASTA scores: opt:
                     633, E(): 3.4e-33, (33.1% identity in 480 aa overlap);
                     Q9HX44|PA3972 from Pseudomonas aeruginosa (549 aa) FASTA
                     scores: opt: 560, E(): 1.7e-28, (29.9% identity in 569 aa
                     overlap); P33224|AIDB_ECOLI|B4187 from Escherichia coli
                     strain K12 (541 aa), FASTA scores: opt: 455, E(): 1e-21,
                     (31.15% identity in 514 aa overlap); etc. Also similar to
                     O86368|FADE8|Rv0672|MTCI376.02c ACYL-COA DEHYDROGENASE
                     from Mycobacterium tuberculosis (542 aa), FASTA scores:
                     opt: 479, E(): 2.9e-23, (32.2% identity in 460 aa
                     overlap). COULD BELONG TO THE ACYL-COA DEHYDROGENASES
                     FAMILY. Protein product from Mb3826 detected using shotgun
                     mass spectrometry and SWATH mass spectrometry. Mb3826
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3Y6S9"
                     /db_xref="InterPro:IPR006091"
                     /db_xref="InterPro:IPR009075"
                     /db_xref="InterPro:IPR009100"
                     /db_xref="InterPro:IPR034184"
                     /db_xref="InterPro:IPR036250"
                     /db_xref="InterPro:IPR041504"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y6S9"
BEGIN
        1 MPEYDLEAVD KLPFSTPEKA QRYQTENYRG AMGLNWYLTD PTLQFIMAYY LRPDELAFAE
       61 PHLTRIGELT GGPVTRWAEE TDRNPPRLER YDRWGHDISR VVLPESFIQS KRAVIEARQA
      121 VRDDAARAGV KPSLALFAAD YLLNQADIGM ACALATGGNM VRSLVTAYAP PDVREFVLGK
      181 LNSGEWDGEA AQLLTERAGG SDLGALETTA TRSGDVWLLN GFKWFASNCA GEAFVVLAKP
      241 EGAPDSTRGV ATFLVLRTRR DGSRNGVRIR RLKDKLGTRS VASGEIEFVD AEAFLLSGEP
      301 SADAGPSDGK GLTRMMELTN RLRLGTASFA LGNARRALVE SLCYAGQRRA FGGALIDKPL
      361 MRRKLAEMVV DVEAALAMVF DGFGAANHRQ PRCLPQRIAV PVTKLKTCRL GITVASDAIE
      421 IHGGNGYIET WPVARLLRDA QVNTIWEGPD NILCLDVRRG IEQTRAHETL LARLRDAVSV
      481 SDDDDTTRLV SRRIEDLDAA ITAWTKLDRQ LAEARLFPLA QFMGDVYAGA LLTEQAAWER
      541 ATRGTDRKAL VARLYARRYL ADQGPLRGID ADCDEALQRF DELVAGAFTA EQT
//