LOCUS SIU02455.1 593 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE ACYL-COA DEHYDROGENASE FADE35 protein. ACCESSION LT708304-3869 PROTEIN_ID SIU02455.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="fadE35" /locus_tag="BQ2027_MB3826" /note="Mb3826, fadE35, len: 593 aa. Equivalent to Rv3797, len: 593 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 593 aa overlap). Probable fadE35, acyl-CoA dehydrogenase (EC 1.3.99.-), similar to many e.g. Q9HY33|PA3593 from Pseudomonas aeruginosa (575 aa) FASTA scores: opt: 838, E(): 2.1e-46, (35.3% identity in 569 aa overlap); Q9ANZ8|AIDB from Burkholderia pseudomallei (Pseudomonas pseudomallei) (554 aa), FASTA scores: opt: 633, E(): 3.4e-33, (33.1% identity in 480 aa overlap); Q9HX44|PA3972 from Pseudomonas aeruginosa (549 aa) FASTA scores: opt: 560, E(): 1.7e-28, (29.9% identity in 569 aa overlap); P33224|AIDB_ECOLI|B4187 from Escherichia coli strain K12 (541 aa), FASTA scores: opt: 455, E(): 1e-21, (31.15% identity in 514 aa overlap); etc. Also similar to O86368|FADE8|Rv0672|MTCI376.02c ACYL-COA DEHYDROGENASE from Mycobacterium tuberculosis (542 aa), FASTA scores: opt: 479, E(): 2.9e-23, (32.2% identity in 460 aa overlap). COULD BELONG TO THE ACYL-COA DEHYDROGENASES FAMILY. Protein product from Mb3826 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb3826 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="GOA:A0A1R3Y6S9" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009075" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR034184" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR041504" /db_xref="UniProtKB/TrEMBL:A0A1R3Y6S9" BEGIN 1 MPEYDLEAVD KLPFSTPEKA QRYQTENYRG AMGLNWYLTD PTLQFIMAYY LRPDELAFAE 61 PHLTRIGELT GGPVTRWAEE TDRNPPRLER YDRWGHDISR VVLPESFIQS KRAVIEARQA 121 VRDDAARAGV KPSLALFAAD YLLNQADIGM ACALATGGNM VRSLVTAYAP PDVREFVLGK 181 LNSGEWDGEA AQLLTERAGG SDLGALETTA TRSGDVWLLN GFKWFASNCA GEAFVVLAKP 241 EGAPDSTRGV ATFLVLRTRR DGSRNGVRIR RLKDKLGTRS VASGEIEFVD AEAFLLSGEP 301 SADAGPSDGK GLTRMMELTN RLRLGTASFA LGNARRALVE SLCYAGQRRA FGGALIDKPL 361 MRRKLAEMVV DVEAALAMVF DGFGAANHRQ PRCLPQRIAV PVTKLKTCRL GITVASDAIE 421 IHGGNGYIET WPVARLLRDA QVNTIWEGPD NILCLDVRRG IEQTRAHETL LARLRDAVSV 481 SDDDDTTRLV SRRIEDLDAA ITAWTKLDRQ LAEARLFPLA QFMGDVYAGA LLTEQAAWER 541 ATRGTDRKAL VARLYARRYL ADQGPLRGID ADCDEALQRF DELVAGAFTA EQT //