LOCUS SIU02318.1 541 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE PERIPLASMIC DIPEPTIDE-BINDING LIPOPROTEIN DPPA protein. ACCESSION LT708304-3732 PROTEIN_ID SIU02318.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="dppA" /locus_tag="BQ2027_MB3690C" /note="Mb3690c, dppA, len: 541 aa. Equivalent to Rv3666c, len: 541 aa, from Mycobacterium tuberculosis strain H37Rv, (99.4% identity in 541 aa overlap). Probable dppA, dipeptide-binding lipoprotein component of dipeptide transport system (see citation below), similar to many substrate-binding proteins e.g. Q9F353|SC9E12.02 PUTATIVE PEPTIDE TRANSPORT SYSTEM SECRETED PEPTIDE-BINDING PROTEIN from Streptomyces coelicolor (544 aa), FASTA scores: opt: 1200, E(): 9e-67, (39.2% identity in 538 aa overlap); P24141|OPPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN from Bacillus subtilis (545 aa), FASTA scores: opt: 523, E(): 7.9e-25, (26.15% identity in 516 aa overlap); P23843|OPPA_ECOLI PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN from Escherichia coli (543 aa), FASTA scores: opt: 452, E(): 2e-20, (25.9% identity in 529 aa overlap); etc. Contains probable N-terminal signal sequence. Protein product from Mb3690c detected using SWATH mass spectrometry. Mb3690c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y4X4" /db_xref="InterPro:IPR000914" /db_xref="InterPro:IPR030678" /db_xref="InterPro:IPR039424" /db_xref="UniProtKB/TrEMBL:A0A1R3Y4X4" BEGIN 1 MVRRMRAALA ALATGLLVLA PVAGCGGGVL SPDVVLVNGG EPPNPLIPTG TNDSNGGRII 61 DRLFAGLMSY DAVGKPSLEV AQSIESADNV NYRITVKPGW KFTDGSPVTA HSFVDAWNYG 121 ALSTNAQLQQ HFFSPIEGFD DVAGAPGDKS RTTMSGLRVV NDLEFTVRLK APTIDFTLRL 181 GHSSFYPLPD SAFRDMAAFG RNPIGNGPYK LADGPAGPAW EHNVRIDLVP NPDYHGNRKP 241 RNKGLRFEFY ANLDTAYADL LSGNLDVLDT IPPSALTVYQ RDLGDHATSG PAAINQTLDT 301 PLRLPHFGGE EGRLRRLALS AAINRPQICQ QIFAGTRSPA RDFTARSLPG FDPNLPGNEV 361 LDYDPQRARR LWAQADAISP WSGRYAIAYN ADAGHRDWVD AVANSIKNVL GIDAVAAPQP 421 TFAGFRTQIT NRAIDSAFRA GWQGDYPSMI GFLAPLFTAG AGSNDVGYIN PEFDAALAAA 481 EAAPTLTESH ELVNDAQRIL FHDMPVVPLW DYISVVGWSS QVSNVTVTWN GLPDYENIVK 541 A //