LOCUS       SIU02165.1              1460 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 pe-
            pgrs family protein pe_pgrs54 protein.
ACCESSION   LT708304-3579
PROTEIN_ID  SIU02165.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PE_PGRS54"
                     /locus_tag="BQ2027_MB3538"
                     /note="Mb3538, PE_PGRS54, len: 1460 aa. Similar to Rv3508,
                     len: 1901 aa, from Mycobacterium tuberculosis strain
                     H37Rv, (71.06% identity in 1901 aa overlap). Member of the
                     Mycobacterium tuberculosis PE family, PGRS subfamily of
                     gly-rich proteins, similar to others from Mycobacterium
                     tuberculosis strains H37Rv and CDC1551 e.g. downstream
                     O53559|Rv3514|MTV023.21 (1489 aa), FASTA scores: opt:
                     6598, E(): 0, (71.05% identity in 1533 aa overlap).
                     Equivalent to AAK47971 from Mycobacterium tuberculosis
                     strain CDC1551 (1384 aa) but shorter 13 aa and with some
                     minor differences between the proteins. Contains five
                     PS00583 pfkB family of carbohydrate kinases signatures 1.
                     REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis,
                     insertions of 9 bp (*-cggcgcggg), 27 bp and 18 bp,
                     deletions of 168 bp, 603 bp and 48 bp, and several
                     substitutions lead to a shorter product compared to its
                     homolog in Mycobacterium tuberculosis strain H37Rv (1460
                     aa versus 1901 aa). Mb3538 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="InterPro:IPR000084"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y615"
BEGIN
        1 MSFVLIAPEF VTAAAGDLTN LGSSISAANA SAASATTQVL AAGADEVSAR IAALFGGFGL
       61 EYQAISAQVA AYHQRFVQAL STGAGAYASA EAAAAEQIVL GVINAPTQAL LGRPLIGDGA
      121 NATTPGGAGG AGGLLFGNGG AGAAGAPGQA GGPGGPAGLW GNGGPGGAGG SGGGTGGAGG
      181 AGGWLFGVGG AGGVGGAGGG TGGAGGPGGL IWGGGGAGGV GGAGGGTGGA GGRAELLFGA
      241 GGAGGAGGAG TDGGPGATGG TGGHGGVGGD GGWLAPGGAG GAGGQGGAGG AGSDGGALGG
      301 TGGTGGTGGA GGAGGRGALL LGAGGQGGLG GAGGQGGTGG AGGDGVLGGV GGTGGKGGVG
      361 GVAGLGGAGG AAGQLFSAGG AAGAVGVGGT GGQGGAGGMG GSGADNASGI GADGGAGGTG
      421 GNAGAGGAGG AAGTGGTGGV VGAAGKAGIG GTGGQGGAGG AGSAGTDATA TGATGGTGFS
      481 GGAGGAGGAG GNTGVGGTNG SGGQGGTGGA GGAGGAGGVG ADNPTGIGGA GGTGGAGGTG
      541 GTGGAAGAGG AGGAVGTGGT GGVVGDVGNA GIGGTGGKGG AGGTGFAGGA GGAGGQGGSS
      601 GAGGTNGSGG AGGTGGQGGA GGAGGAGADN PTGIGGAGGT GGTGGAAGAG GAGGAIGTGG
      661 TGGAVGSVGN AGIGGTGGTG GVGGAGGAGA AAAAGSSATG GAGFAGGAGG EGGAGGNSGV
      721 GGTNGSGGAG GAGGKGGTGG AGGSGADNPT GAGFAGGAGG TGGAAGAGGA GGATGTGGTG
      781 GVVGATGSAG IGGAGGRGGD GGDGASGLGL GLSGFDGGQG GQGGDGGSAG AGGINGAGGA
      841 GGDGGDGGDG ATGAAGLGDN GGVGGDGGAG GAAGNGGNAG VGLTAKAGDG GAAGNGGNGG
      901 AGGAGGAGDN NFNGGQGGAG GQGGQGGLGG ASTTSINANG GAGGNGGTGG KGGAGGAGTL
      961 GVGGSGGTGG DGGDAGAGGG GGFGGAAGKA GGGGNGGVGG DGGEGASGLG LDLSGFDGGQ
     1021 GGQGGAGGNA GAGGINGAGG TGGTGGAGGD GAPATLIGGP DGGDGGQGGI GGDGGNAGFG
     1081 AGVPGDGGIG GTGGAGGAGG AGGAGDAGAD GDPSIDGGQG GAGGHGGQGG KGGLNSTGLA
     1141 SAASGDGGNG GAGGAGGNGG DGDGFIGGSG GTGGTGGDAG AGGLANTGGT AGNAGIGGAG
     1201 GRGGDGGAGD SGALSQDGNG FAGGQGGQGG AGGNAGAGGI NGAGGTGGTG GAGGDGAPAT
     1261 LIGGPDGGDG GQGGGAGFGS GVAGAAGAGG NGGKGGDGGT GGTGGTNFAG GQGGAGGRGG
     1321 AGGNGANGVG DNAAGGDGGN GGAGGLGGGG GTGGTNGNGG LGGGGGNGGA GGAGGTPTGS
     1381 GTEGTGGDGG DAGAGGNGGS ATGVGNGGNG GDGGNGGDGG NGAPGGFGGG AGAGGLGGSG
     1441 AGGGTDGDDG NGGSPGTDGS
//