LOCUS       SIU02089.1               281 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 possible
            transposase (fragment) protein.
ACCESSION   LT708304-3503
PROTEIN_ID  SIU02089.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB3461C"
                     /note="Mb3461c, -, len: 281 aa. Equivalent to Rv3431c,
                     len: 281 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 281 aa overlap). Possible truncated
                     transposase for IS1552, similar to, but shorter than other
                     transposases e.g. P72303 from Rhodococcus opacus (418 aa),
                     FASTA scores: opt: 1509, E(): 1.2e-91, (80.95% identity in
                     278 aa overlap); Q9AKV5 from Mycobacterium
                     paratuberculosis (395 aa), FASTA scores: opt: 1115, E():
                     7.8e-66, (63.45% identity in 268 aa overlap); etc. Mb3461c
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3Y489"
                     /db_xref="InterPro:IPR001207"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y489"
BEGIN
        1 MFAELIRAGL QALIEAEATE AIGAGRYERS DGRIVHRNGH RPKTVSTTAG DIEVQIPKLR
       61 AGSFFPSLLE RRRRIDKALH AVIMEAYVHG VSTRSVDDLV AAMGVQAGVS KSEVSRICAG
      121 LDTEIEAFRT RSLTHTEFPY VFCDATFCKV RVGAHVVSQA LVVATGVSID GTREVLGTAV
      181 GDSESYEFWR EFLASLKARG LTGVHLVISD AHAGLKAAVA QQFSGASWQR CRVHFMRNLY
      241 TAVAAKHAPA VTVAVKTIFA HTDPEEVGAQ WDRVADPLCQ P
//