LOCUS SIU02089.1 281 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 possible transposase (fragment) protein. ACCESSION LT708304-3503 PROTEIN_ID SIU02089.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB3461C" /note="Mb3461c, -, len: 281 aa. Equivalent to Rv3431c, len: 281 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 281 aa overlap). Possible truncated transposase for IS1552, similar to, but shorter than other transposases e.g. P72303 from Rhodococcus opacus (418 aa), FASTA scores: opt: 1509, E(): 1.2e-91, (80.95% identity in 278 aa overlap); Q9AKV5 from Mycobacterium paratuberculosis (395 aa), FASTA scores: opt: 1115, E(): 7.8e-66, (63.45% identity in 268 aa overlap); etc. Mb3461c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="GOA:A0A1R3Y489" /db_xref="InterPro:IPR001207" /db_xref="UniProtKB/TrEMBL:A0A1R3Y489" BEGIN 1 MFAELIRAGL QALIEAEATE AIGAGRYERS DGRIVHRNGH RPKTVSTTAG DIEVQIPKLR 61 AGSFFPSLLE RRRRIDKALH AVIMEAYVHG VSTRSVDDLV AAMGVQAGVS KSEVSRICAG 121 LDTEIEAFRT RSLTHTEFPY VFCDATFCKV RVGAHVVSQA LVVATGVSID GTREVLGTAV 181 GDSESYEFWR EFLASLKARG LTGVHLVISD AHAGLKAAVA QQFSGASWQR CRVHFMRNLY 241 TAVAAKHAPA VTVAVKTIFA HTDPEEVGAQ WDRVADPLCQ P //