LOCUS SIU02049.1 749 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs52 protein. ACCESSION LT708304-3463 PROTEIN_ID SIU02049.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS52" /locus_tag="BQ2027_MB3420" /note="Mb3420, PE_PGRS52, len: 749 aa. Similar to Rv3388, len: 731 aa, from Mycobacterium tuberculosis strain H37Rv, (94.8% identity in 734 aa overlap). Member of the M. tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to many PE-family proteins from M. tuberculosis strains H37Rv and CDC1551 e.g. O53553|YZ08_MYCTU|RV3508|MTV023.15 (1901 aa), FASTA scores: opt: 2380, E(): 3.6e-87, (53.8% identity in 773 aa overlap); and MTV023_21, MTV023_18, MTV023_14, MTV039_16, MTCY441_4. REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, insertions of 60 bp and 78 bp, and deletions of 75 bp and 9 bp (cggcggcgc-*), lead to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (749 aa versus 731 aa)." /db_xref="InterPro:IPR000084" /db_xref="UniProtKB/TrEMBL:A0A1R3Y432" BEGIN 1 MSFVIANPEM LAAAATDLAG IRSAISAATA AAAAPTIQVA AAGADEVSLA ISALFGQHAQ 61 AYQALSAQAT IFHDQFVQAL TSGGNLYAAA ESHTVEQMVL NAINAPTQTL FGRPLIGDGA 121 NGTAENPDGQ NGGLLFGNGG NGFTQTTAGV AGGNGGSAGL IGNGGAGGIG GAGTGTGGHG 181 GAGGAGGRAW LWGTGGAGGA GAAAIGNAVT PGGAGGAGGA GGDGGWLFGD GGAGGTGGNG 241 GSGFNSLTSS VGGAGGAGGH AGLFGAGGTG GTGGIGGQNT ETGPAASNGG AGGAGGGGGY 301 LVGDGGAGGT GGAGGKNSSG GATLTGGTGG TGGAGGAAGW LYGSGGAGGA GGLNNAGGAT 361 GGTGGTGGAG GSGAWLYGNG GAAGAGGNGG NNTSAGTGGV GASGGTGGNA GLIGAGGHGG 421 AGGAGGNQTG GVGNGGAGGN GGAGGAGGQL YGNGGDGGNG GAGGANIAGG NGSDGGAAGH 481 GGAGGSARLI GAGGHGGDGG AGGNTAGRRA DAIAGTGGDG GNGGNGGLLS GNAGAGGHGG 541 AGGSSTATTT TGTPPTGATG GNGGNGGAGG TAGFTGSGGI GGNGGAGGTG GNAGVALSVG 601 STGGLGGNGG SGGLGGGGGS LFGNGGAGGV GATGGNAGSG IGPASVGGNG GKGGVGAAGG 661 LAGQIGNGGS GGSGGAGGNG GTGDTAGNGG NGGAGAVGGN AQLIGNGGNG GGGGNGGTGA 721 TPGTGGAGAA GGTGGTLFGA PGTTGADGT //