LOCUS       SIU02049.1               749 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 pe-
            pgrs family protein pe_pgrs52 protein.
ACCESSION   LT708304-3463
PROTEIN_ID  SIU02049.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PE_PGRS52"
                     /locus_tag="BQ2027_MB3420"
                     /note="Mb3420, PE_PGRS52, len: 749 aa. Similar to Rv3388,
                     len: 731 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (94.8% identity in 734 aa overlap). Member of the M.
                     tuberculosis PE family, PGRS subfamily of gly-rich
                     proteins, similar to many PE-family proteins from M.
                     tuberculosis strains H37Rv and CDC1551 e.g.
                     O53553|YZ08_MYCTU|RV3508|MTV023.15 (1901 aa), FASTA
                     scores: opt: 2380, E(): 3.6e-87, (53.8% identity in 773 aa
                     overlap); and MTV023_21, MTV023_18, MTV023_14, MTV039_16,
                     MTCY441_4. REMARK-M.bovis-M.tuberculosis: In Mycobacterium
                     bovis, insertions of 60 bp and 78 bp, and deletions of 75
                     bp and 9 bp (cggcggcgc-*), lead to a longer product
                     compared to the homolog in Mycobacterium tuberculosis
                     strain H37Rv (749 aa versus 731 aa)."
                     /db_xref="InterPro:IPR000084"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y432"
BEGIN
        1 MSFVIANPEM LAAAATDLAG IRSAISAATA AAAAPTIQVA AAGADEVSLA ISALFGQHAQ
       61 AYQALSAQAT IFHDQFVQAL TSGGNLYAAA ESHTVEQMVL NAINAPTQTL FGRPLIGDGA
      121 NGTAENPDGQ NGGLLFGNGG NGFTQTTAGV AGGNGGSAGL IGNGGAGGIG GAGTGTGGHG
      181 GAGGAGGRAW LWGTGGAGGA GAAAIGNAVT PGGAGGAGGA GGDGGWLFGD GGAGGTGGNG
      241 GSGFNSLTSS VGGAGGAGGH AGLFGAGGTG GTGGIGGQNT ETGPAASNGG AGGAGGGGGY
      301 LVGDGGAGGT GGAGGKNSSG GATLTGGTGG TGGAGGAAGW LYGSGGAGGA GGLNNAGGAT
      361 GGTGGTGGAG GSGAWLYGNG GAAGAGGNGG NNTSAGTGGV GASGGTGGNA GLIGAGGHGG
      421 AGGAGGNQTG GVGNGGAGGN GGAGGAGGQL YGNGGDGGNG GAGGANIAGG NGSDGGAAGH
      481 GGAGGSARLI GAGGHGGDGG AGGNTAGRRA DAIAGTGGDG GNGGNGGLLS GNAGAGGHGG
      541 AGGSSTATTT TGTPPTGATG GNGGNGGAGG TAGFTGSGGI GGNGGAGGTG GNAGVALSVG
      601 STGGLGGNGG SGGLGGGGGS LFGNGGAGGV GATGGNAGSG IGPASVGGNG GKGGVGAAGG
      661 LAGQIGNGGS GGSGGAGGNG GTGDTAGNGG NGGAGAVGGN AQLIGNGGNG GGGGNGGTGA
      721 TPGTGGAGAA GGTGGTLFGA PGTTGADGT
//