LOCUS       SIU02019.1                97 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 probable
            integral membrane protein protein.
ACCESSION   LT708304-3433
PROTEIN_ID  SIU02019.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB3390C"
                     /note="Mb3390c, -, len: 97 aa. Equivalent to Rv3355c, len:
                     97 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 97 aa overlap). Hypothetical protein,
                     equivalent to O32878|MLCB1779.16c|ML0675 HYPOTHETICAL 9.6
                     KDA PROTEIN from Mycobacterium leprae (91 aa), FASTA
                     scores: opt: 439, E(): 3.9e-23, (78.9% identity in 90 aa
                     overlap). Identical, but with a gap, to
                     O50377|Rv3346c|MTV004.02c HYPOTHETICAL 8.9 KDA PROTEIN
                     from Mycobacterium tuberculosis (85 aa), FASTA scores:
                     opt: 413, E(): 2.1e-21, (85.55% identity in 97 aa
                     overlap). Also some similarity to other proteins e.g.
                     Q9K3J5|SC2A6.10 PUTATIVE INTEGRAL MEMBRANE PROTEIN from
                     Streptomyces coelicolor (178 aa), FASTA scores: opt: 147,
                     E(): 0.003, (31.25% identity in 80 aa overlap). Mb3390c
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3Y3Z7"
                     /db_xref="InterPro:IPR021385"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y3Z7"
BEGIN
        1 MTVRAVFRRT VGAQWPILLV GSIFAVGFVL AGANFWRRGA LLIGIGVGVA AVLRLVLSEE
       61 RAGLLVVRSK GIDFVTTVTV AAAMVYIAST IDPLGTG
//