LOCUS       SIU02004.1              1338 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 ppe
            family protein ppe54 protein.
ACCESSION   LT708304-3418
PROTEIN_ID  SIU02004.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PPE54"
                     /locus_tag="BQ2027_MB3375C"
                     /note="Mb3375c, PPE54, len: 1338 aa. Similar to 3' end of
                     Rv3343c, len: 2523 aa, from Mycobacterium tuberculosis
                     strain H37Rv, (98.6% identity in 1151 aa overlap). Member
                     of the Mycobacterium tuberculosis PPE family, MPTR
                     subgroup of Gly-, Asn-rich proteins. Most similar to
                     O50379|Rv3350c|MTV004.07c|MTV004_5 from Mycobacterium
                     tuberculosis strain H37Rv (3716 aa), FASTA scores: opt:
                     4672, E(): 4e-211, (44.2% identity in 3174 aa overlap);
                     and also similar to MTV004_3, MTCY63_9, MTY13E10_17,
                     MTY13E10_16, MTCY180_1, MTV050_1, MTCY3C7_23, MTV014_3,
                     MTCY63_10; etc. REMARK-M.bovis-M.tuberculosis: In
                     Mycobacterium bovis, a 3555 bp deletion leads to a shorter
                     product compared to its homolog in Mycobacterium
                     tuberculosis strain H37Rv."
                     /db_xref="InterPro:IPR000030"
                     /db_xref="InterPro:IPR002989"
                     /db_xref="InterPro:IPR038332"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y3X3"
BEGIN
        1 MSFVVMPPEI NSLLIYTGAG PGPLLAAAAA WDELAAELGS AAAAFGSVTS GLVGGIWQGP
       61 SSVAMAAAAA PYAGWLSAAA ASAESAAGQA RAVVGVFEAA LAATVDPFVI AANRSRLVSL
      121 ALSNLFGQNT PAIAAAEFDY ELMWAQDVAA MLGYHTGASA AAEALAPFGS PLASLAAAAE
      181 PAKSLAVNLG LANVGLFNAG SGNVGSYNVG AGNVGSYNVG GGNIGGNNVG LGNVGFGNVG
      241 LANSGLTPGL MGLGNIGFGN AGSYNFGLAN MGVGNIGFAN TGSGNFGIGL TGDNLTGFGG
      301 FNTGSGNVGL FNSGTGNVGF FNSGTGNWGV FNSGSYNTGI GNSGIASTGL FNAGGFNTGV
      361 VNAGSYNTGS FNAGQANTGG FNPGSVNTGW LNTGDTNTGV ANSGDVNTGA FISGNYSNGV
      421 LWRGDYQGLL GFSYRPAVLP QTPFLDLTLT GGLGSVVIPA IDIPAIRPEF SANVAIDSFT
      481 VPSIPIPQID LAATTVSVGL GPITVPHLDI PRVPVTLNYL FGSQPGGPLK IGPITGLFNT
      541 PIGLTPLALS QIVIGASSSQ GTITAFLANL PFSTPVVTID EIPLLASITG HSEPVDIFPG
      601 GLTIPAMNPL SINLSGGTGA VTIPAITIGE IPFDLVAHST LGPVHILIDL PAVPGFGNTT
      661 GAPSSGFFNS GAGGVSGFGN VGAMVSGGWN QAPSALLGGG SGVFNAGTLH SGVLNFGSGM
      721 SGLFNTSVLG LGAPALVSGL GSVGQQLSGL LASGTALHQG LVLNFGLADV GLGNVGLGNV
      781 GDFNLGAGNV GGFNVGGGNI GGNNVGLGNV GWGNFGLGNS GLTPGLMGLG NIGFGNAGSY
      841 NFGLANMGVG NIGFANTGSG NFGIGLTGDN LTGFGGFNTG SGNVGLFNSG TGNVGFFNSG
      901 TGNWGVFNSG SYNTGIGNSG IASTGLFNAG GFNTGVVNAG SYNTGSFNAG QANTGGFNPG
      961 SVNTGWLNTG DTNTGVANSG DVNTGAFISG NYSNGAFWRG DYQGLLGFSY TSTIIPEFTV
     1021 ANIHASGGAG PIIVPSIQFP AIPLDLSATG HIGGFTIPPV SISPITVRID PVFDLGPITV
     1081 QDITIPALGL DPATGVTVGP IFSSGSIIDP FSLTLLGFIN VNVPAIQTAP SEILPFTVLL
     1141 SSLGVTHLTP EITIPGFHIP VDPIHVELPL SVTIGPFVSP EITIPQLPLG LALSGATPAF
     1201 AFPLEITIDR IPVVLDVNAL LGPINAGLVI PPVPGFGNTT AVPSSGFFNI GGGGGLSGFH
     1261 NLGAGMSGVL NAISDPLLGS ASGFANFGTQ LSGILNRGAD ISGVYNTGAL GLITSALVSG
     1321 FGNVGQQLAG LIYTGTGP
//