LOCUS       SIU01790.1               468 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            ACYL-CoA DEHYDROGENASE FADE24 protein.
ACCESSION   LT708304-3204
PROTEIN_ID  SIU01790.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="fadE24"
                     /locus_tag="BQ2027_MB3163"
                     /note="Mb3163, fadE24, len: 468 aa. Equivalent to Rv3139,
                     len: 468 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 468 aa overlap). Probable fadE24,
                     acyl-CoA dehydrogenase (1.3.99.-), equivalent to
                     O32890|MLCB1779.30|FADE24|ML0661 PUTATIVE ACYL-CoA
                     DEHYDROGENASE from Mycobacterium leprae (465 aa), FASTA
                     scores: opt: 2587, E(): 4e-153, (83.6% identity in 464 aa
                     overlap). Similar to other e.g. Q9HUH0|PA4995 from
                     Pseudomonas aeruginosa (429 aa), FASTA scores: opt: 1139,
                     E(): 2.8e-63, (45.3% identity in 426 aa overlap);
                     Q9K6D0|MMGC|BH3799 from Bacillus halodurans (379 aa),
                     FASTA scores: opt: 603, E(): 4.7e-30, (30.3% identity in
                     366 aa overlap); Q9K6D1|ACDA|BH3798 from Bacillus
                     halodurans (380 aa), FASTA scores: opt: 601, E(): 6.3e-30,
                     (32.25% identity in 363 aa overlap); etc. Contains
                     acyl-CoA dehydrogenases signature 2 (PS00073) near
                     C-terminus. BELONGS TO THE ACYL-CoA DEHYDROGENASES FAMILY.
                     TBparse score is 0.881. Protein product from Mb3163
                     detected using shotgun mass spectrometry and SWATH mass
                     spectrometry. Mb3163 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:A0A1R3Y393"
                     /db_xref="InterPro:IPR006089"
                     /db_xref="InterPro:IPR006091"
                     /db_xref="InterPro:IPR009075"
                     /db_xref="InterPro:IPR009100"
                     /db_xref="InterPro:IPR013786"
                     /db_xref="InterPro:IPR036250"
                     /db_xref="InterPro:IPR037069"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y393"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MTNTTSAANA AKPSGARTDR RGRTTGVGLA PHKRTGIDVA LALLTPIVGQ EFLDKYRLRD
       61 PLNRSLRYGV KTMFATAGAA TRQFQRVQGL RGGPTRLKSS GRDYFDLTPD DDQKLIIETV
      121 DEFAEEVLRP AAHDADDAAT YPSDLTAKAA ELGITAINIP EDFDGIAEHR SSVTNVLVAE
      181 ALAYGDMGLA LPILAPGGVA SALTHWGSAD QQATYLKEFA GENVPQACVA ITEPQPLFDP
      241 TRLKTTAVRT PSGYRLDGVK SLIPAAADAE LFIVGAQLGG KPALFIVESA ASGLTVKADP
      301 SMGIRGAALG QVELCGVSVP LNARLGEDEA SDNDYSEALA LARLGWAALA VGTSHAVLDY
      361 VVPYVKQRQA FGEPIAHRQA VAFMCANIAI ELDGLRLITW RGASRAEQGL PFAREAALAK
      421 RLGSDKGMQI GLDGVQLLGG HGYTKEHPVE RWYRDLRAIG VAEGVVVI
//