LOCUS SIU01790.1 468 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE ACYL-CoA DEHYDROGENASE FADE24 protein. ACCESSION LT708304-3204 PROTEIN_ID SIU01790.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="fadE24" /locus_tag="BQ2027_MB3163" /note="Mb3163, fadE24, len: 468 aa. Equivalent to Rv3139, len: 468 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 468 aa overlap). Probable fadE24, acyl-CoA dehydrogenase (1.3.99.-), equivalent to O32890|MLCB1779.30|FADE24|ML0661 PUTATIVE ACYL-CoA DEHYDROGENASE from Mycobacterium leprae (465 aa), FASTA scores: opt: 2587, E(): 4e-153, (83.6% identity in 464 aa overlap). Similar to other e.g. Q9HUH0|PA4995 from Pseudomonas aeruginosa (429 aa), FASTA scores: opt: 1139, E(): 2.8e-63, (45.3% identity in 426 aa overlap); Q9K6D0|MMGC|BH3799 from Bacillus halodurans (379 aa), FASTA scores: opt: 603, E(): 4.7e-30, (30.3% identity in 366 aa overlap); Q9K6D1|ACDA|BH3798 from Bacillus halodurans (380 aa), FASTA scores: opt: 601, E(): 6.3e-30, (32.25% identity in 363 aa overlap); etc. Contains acyl-CoA dehydrogenases signature 2 (PS00073) near C-terminus. BELONGS TO THE ACYL-CoA DEHYDROGENASES FAMILY. TBparse score is 0.881. Protein product from Mb3163 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb3163 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y393" /db_xref="InterPro:IPR006089" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009075" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR013786" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:A0A1R3Y393" /experiment="experimental evidence, no additional details recorded" BEGIN 1 MTNTTSAANA AKPSGARTDR RGRTTGVGLA PHKRTGIDVA LALLTPIVGQ EFLDKYRLRD 61 PLNRSLRYGV KTMFATAGAA TRQFQRVQGL RGGPTRLKSS GRDYFDLTPD DDQKLIIETV 121 DEFAEEVLRP AAHDADDAAT YPSDLTAKAA ELGITAINIP EDFDGIAEHR SSVTNVLVAE 181 ALAYGDMGLA LPILAPGGVA SALTHWGSAD QQATYLKEFA GENVPQACVA ITEPQPLFDP 241 TRLKTTAVRT PSGYRLDGVK SLIPAAADAE LFIVGAQLGG KPALFIVESA ASGLTVKADP 301 SMGIRGAALG QVELCGVSVP LNARLGEDEA SDNDYSEALA LARLGWAALA VGTSHAVLDY 361 VVPYVKQRQA FGEPIAHRQA VAFMCANIAI ELDGLRLITW RGASRAEQGL PFAREAALAK 421 RLGSDKGMQI GLDGVQLLGG HGYTKEHPVE RWYRDLRAIG VAEGVVVI //