LOCUS SIU01715.1 758 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE CARBON STARVATION PROTEIN A HOMOLOG CSTA protein. ACCESSION LT708304-3129 PROTEIN_ID SIU01715.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="cstA" /locus_tag="BQ2027_MB3090" /note="Mb3090, cstA, len: 758 aa. Equivalent to Rv3063, len: 758 aa, from Mycobacterium tuberculosis strain H37Rv, (99.6% identity in 758 aa overlap). Probable cstA, integral membrane starvation-induced stress response protein, similar to other e.g. P15078|CSTA_ECOLI|B0598 from Escherichia coli strain K12 (701 aa), FASTA scores: opt: 2357, E(): 9.5e-137, (51.25% identity in 712 aa overlap); AAG54933|CSTA from Escherichia coli strain O157:H7 EDL933 (701 aa), FASTA scores: opt: 2356, E(): 1.1e-136, (51.1% identity in 712 aa overlap); etc. Predicted to be membrane associated. Similarity suggests start at GTG at 16801 in Y22D7 but no RBS obvious so TBparse-predicted start at 16881 taken. BELONGS TO THE CSTA FAMILY. Mb3090 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y4W9" /db_xref="InterPro:IPR003706" /db_xref="InterPro:IPR025299" /db_xref="UniProtKB/TrEMBL:A0A1R3Y4W9" BEGIN 1 MAAPTPSNRI EERSGHASCV RADADLPPVA ILGRSPITLR HKIFFVAVAV IGALAWTVVA 61 FFRNEPVNAV WIVVAAGCTY IIGFRFYARL IEMKVVRPRD DHATPAEILD DGTDYVPTDR 121 RVVFGHHFAA IAGAGPLVGP VLATQMGYLP SSIWIVVGAV LAGCVQDYLV LWISVRRRGR 181 SLGQMVRDEL GATAGVAALV GIPVIITIVI AVLALVVVRA LAKSPWGVFS IAMTIPIAIF 241 MGCYLRFLRP GRVSEVSLIG IGLLLLAVVS GDWVAHTSWG AAWFSLSPVT LCWLLISYGF 301 AASVLPVWLL LAPRDYLSTF MKVGTIALLA IGVCAAHPII EAPAVSKFAG SGNGPVFAGS 361 LFPFLFITIA CGALSGFHAL ICSGTTPKML EKEGQMRVIG YCGMMTESFV AVIALLTAAI 421 LDQHLYFTLN APSLHTHDSA ATAAKYVNGL GLTGSPVTPD HISQAAASVG EQTIVSRTGG 481 APTLAFGMAE MLHRVVGGVG LKAFWYHFAI MFEALFILTT VDAGTRAARF MISDALGNFG 541 GVLRKLQNPS WRPGAWACSL VVVAAWGSIL LLGVTDPLGG INTLFPLFGI ANQLLAGIAP 601 TVITVVVIKK GRLKWAWIPG IPLLWDLAVT LTASWQKIFS ADPSVGYWTQ HAHYAAAQHA 661 GETAFGSATN ADEINDVVRN TFVQGTLSIV FVVVVVLVVV AGVIVALKTI RGRGIPLAED 721 DPAPSTLFAP AGLIPTAAER KLQRRLGAPA SASVAAPD //