LOCUS       SIU01715.1               758 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            CARBON STARVATION PROTEIN A HOMOLOG CSTA protein.
ACCESSION   LT708304-3129
PROTEIN_ID  SIU01715.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="cstA"
                     /locus_tag="BQ2027_MB3090"
                     /note="Mb3090, cstA, len: 758 aa. Equivalent to Rv3063,
                     len: 758 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.6% identity in 758 aa overlap). Probable cstA,
                     integral membrane starvation-induced stress response
                     protein, similar to other e.g. P15078|CSTA_ECOLI|B0598
                     from Escherichia coli strain K12 (701 aa), FASTA scores:
                     opt: 2357, E(): 9.5e-137, (51.25% identity in 712 aa
                     overlap); AAG54933|CSTA from Escherichia coli strain
                     O157:H7 EDL933 (701 aa), FASTA scores: opt: 2356, E():
                     1.1e-136, (51.1% identity in 712 aa overlap); etc.
                     Predicted to be membrane associated. Similarity suggests
                     start at GTG at 16801 in Y22D7 but no RBS obvious so
                     TBparse-predicted start at 16881 taken. BELONGS TO THE
                     CSTA FAMILY. Mb3090 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:A0A1R3Y4W9"
                     /db_xref="InterPro:IPR003706"
                     /db_xref="InterPro:IPR025299"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y4W9"
BEGIN
        1 MAAPTPSNRI EERSGHASCV RADADLPPVA ILGRSPITLR HKIFFVAVAV IGALAWTVVA
       61 FFRNEPVNAV WIVVAAGCTY IIGFRFYARL IEMKVVRPRD DHATPAEILD DGTDYVPTDR
      121 RVVFGHHFAA IAGAGPLVGP VLATQMGYLP SSIWIVVGAV LAGCVQDYLV LWISVRRRGR
      181 SLGQMVRDEL GATAGVAALV GIPVIITIVI AVLALVVVRA LAKSPWGVFS IAMTIPIAIF
      241 MGCYLRFLRP GRVSEVSLIG IGLLLLAVVS GDWVAHTSWG AAWFSLSPVT LCWLLISYGF
      301 AASVLPVWLL LAPRDYLSTF MKVGTIALLA IGVCAAHPII EAPAVSKFAG SGNGPVFAGS
      361 LFPFLFITIA CGALSGFHAL ICSGTTPKML EKEGQMRVIG YCGMMTESFV AVIALLTAAI
      421 LDQHLYFTLN APSLHTHDSA ATAAKYVNGL GLTGSPVTPD HISQAAASVG EQTIVSRTGG
      481 APTLAFGMAE MLHRVVGGVG LKAFWYHFAI MFEALFILTT VDAGTRAARF MISDALGNFG
      541 GVLRKLQNPS WRPGAWACSL VVVAAWGSIL LLGVTDPLGG INTLFPLFGI ANQLLAGIAP
      601 TVITVVVIKK GRLKWAWIPG IPLLWDLAVT LTASWQKIFS ADPSVGYWTQ HAHYAAAQHA
      661 GETAFGSATN ADEINDVVRN TFVQGTLSIV FVVVVVLVVV AGVIVALKTI RGRGIPLAED
      721 DPAPSTLFAP AGLIPTAAER KLQRRLGAPA SASVAAPD
//