LOCUS       SIU01707.1               346 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 possible
            dna-damage-inducible protein p dinp (dna polymerase v)
            (pol iv 2) (dna nucleotidyltransferase (dna-directed))
            protein.
ACCESSION   LT708304-3121
PROTEIN_ID  SIU01707.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="dinP"
                     /locus_tag="BQ2027_MB3082"
                     /note="Mb3082, dinP, len: 346 aa. Equivalent to Rv3056,
                     len: 346 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 346 aa overlap). Possible dinP,
                     DNA-damage-inducible protein, similar to other e.g.
                     AAK45855|MT1589 from Mycobacterium tuberculosis strain
                     CDC1551 (485 aa), FASTA scores: opt: 620, E(): 6.1e-32,
                     (37.2% identity in 344 aa overlap); BAB49140|MLR1877 from
                     Rhizobium loti (Mesorhizobium loti) (415 aa), FASTA
                     scores: opt: 533, E(): 1.8e-26, (34.35% identity in 358 aa
                     overlap); and BAB54888|MLL9709 from Rhizobium loti
                     (Mesorhizobium loti) (361 aa), FASTA scores: opt: 532,
                     E(): 1.8e-26, (35.35% identity in 348 aa overlap).
                     Extensive similarity to proteins induced by DNA damage
                     such as dinP, mucB, umuC. Mb3082 found to be expressed
                     during exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:P63988"
                     /db_xref="InterPro:IPR001126"
                     /db_xref="InterPro:IPR017961"
                     /db_xref="InterPro:IPR022880"
                     /db_xref="InterPro:IPR036775"
                     /db_xref="UniProtKB/Swiss-Prot:P63988"
BEGIN
        1 MPTAAPRWIL HVDLDQFLAS VELLRHPELA GLPVIVGGNG DPTEPRKVVT CASYEARAYG
       61 VRAGMPLRTA ARRCPEATFL PSNPAAYNAA SEEVVALLRD LGYPVEVWGW DEAYLAVAPG
      121 TPDDPIEVAE EIRKVILSQT GLSCSIGISD NKQRAKIATG LAKPAGIYQL TDANWMAIMG
      181 DRTVEALWGV GPKTTKRLAK LGINTVYQLA HTDSGLLMST FGPRTALWLL LAKGGGDTEV
      241 SAQAWVPRSR SHAVTFPRDL TCRSEMESAV TELAQRTLNE VVASSRTVTR VAVTVRTATF
      301 YTRTKIRKLQ APSTDPDVIT AAARHVLDLF ELDRPVRLLG VRLELA
//