LOCUS       SIU01590.1               176 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE
            TRANSPOSASE protein.
ACCESSION   LT708304-3004
PROTEIN_ID  SIU01590.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB2969"
                     /note="Mb2969, -, len: 176 aa. Equivalent to Rv2943A, len:
                     176 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 176 aa overlap). Possible transposase,
                     similar to many e.g. AJ238712|MBO238712_2 PUTATIVE
                     TRANSPOSASE (IS21-l) from Mycobacterium bovis BCG (266
                     aa), FASTA scores: opt: 762, E(): 0, (100.0% identity in
                     118 aa overlap). Possible frameshift after codon 118 i.e.
                     near position 3290056, to fuse with Rv2944. Mb2969 found
                     to be expressed during exponential growth in Sauton's
                     minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3Y2N8"
                     /db_xref="InterPro:IPR002611"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y2N8"
BEGIN
        1 MPTTKATQRR DVSTEIAYLT RALKAPTLRE SVSRLADRAR AENWSHEEYL AACLQREVSA
       61 RESHGGEGRI RAARFPARKS LEEFDFEHAR GLKRDTIAHL GTLDFITARD NVVFLGPAWH
      121 REDSSCGRPG DTRVSGRSSG AVRHRRRMGS TARRGSPRRA HLRRTHPALP LSAPGG
//