LOCUS       SIU01562.1               626 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 DNA
            or RNA helicase of superfamily protein II protein.
ACCESSION   LT708304-2976
PROTEIN_ID  SIU01562.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB2941"
                     /note="Mb2941, -, len: 626 aa. Equivalent to Rv2917, len:
                     626 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.8% identity in 626 aa overlap). Conserved hypothetical
                     ala-, arg-rich protein, highly similar (but longer 34 aa)
                     to O33011|ML1624|MLCB250.18C HYPOTHETICAL 65.2 KDA PROTEIN
                     from Mycobacterium leprae (596 aa), FASTA scores: opt:
                     3117, E(): 9e-183, (79.8% identity in 584 aa overlap).
                     Also highly similar to Q9S2E8|SCE19A.36C HYPOTHETICAL 66.2
                     KDA PROTEIN from Streptomyces coelicolor (598 aa), FASTA
                     scores: opt: 1921, E(): 1.1e-109, (56.08% identity in 567
                     aa overlap); and Q9S3Y6|SDRA SDRA PROTEIN from
                     Streptomyces coelicolor (597 aa), FASTA scores: opt: 1896,
                     E(): 3.6e-108, (55.75% identity in 567 aa overlap). And
                     shows some similarity with others proteins from other
                     organisms. Equivalent to AAK47311 putative RNA helicase
                     from Mycobacterium tuberculosis strain CDC1551 (602 aa)
                     but longer 24 aa. Contains PS00017 ATP/GTP-binding site
                     motif (P-loop)."
                     /db_xref="GOA:A0A1R3Y2J6"
                     /db_xref="InterPro:IPR006935"
                     /db_xref="InterPro:IPR014001"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y2J6"
BEGIN
        1 MRVTRLVDAE STRCDVGPAP KSVAMLHFTA ATSRFRLGRE RANSVRSDGG WGVLQPVSAT
       61 FNPPLRGWQR RALVQYLGTQ PRDFLAVATP GSGKTSFALR IAAELLRYHT VEQVTVVVPT
      121 EHLKVQWAHA AAAHGLSLDP KFANSNPQTS PEYHGVMVTY AQVASHPTLH RVRTEARKTL
      181 VVFDEIHHGG DAKTWGDAIR EAFGDATRRL ALTGTPFRSD DSPIPFVSYQ PDADGVLRSQ
      241 ADHTYGYAEA LADGVVRPVV FLAYSGQARW RDSAGEEYEA RLGEPLSAEQ TARAWRTALD
      301 PEGEWMPAVI TAADRRLRQL RAHVPDAGGM IIASDRTTAR AYARLLTTMT AEEPTVVLSD
      361 DPGSSARITE FAQGTSRWLV AVRMVSEGVD VPRLSVGVYA TNASTPLFFA QAIGRFVRSR
      421 RPGETASIFV PSVPNLLQLA SALEVQRNHV LGRPHRESAH DPLDGDPATR TQTERGGAER
      481 GFTALGADAE LDQVIFDGSS FGTATPTGSD EEADYLGIPG LLDAEQMRAL LHRRQDEQLR
      541 KRAQLQKGAT QPATSGASAS VHGQLRDLRR ELHTLVSIAH HRTGKPHGWI HDELRRRCGG
      601 PPIAAATRAQ IKARIDALRQ LNSERS
//