LOCUS       SIU01554.1               162 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 30s
            ribosomal protein s16 rpsp protein.
ACCESSION   LT708304-2968
PROTEIN_ID  SIU01554.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="rpsP"
                     /locus_tag="BQ2027_MB2933C"
                     /note="Mb2933c, rpsP, len: 162 aa. Equivalent to Rv2909c,
                     len: 162 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 162 aa overlap). Probable rpsP, 30S
                     ribosomal protein S16, equivalent to O33014|RS16_MYCLE 30S
                     RIBOSOMAL PROTEIN S16 from Mycobacterium leprae (160 aa),
                     FASTA scores: opt: 828, E(): 1.6e-39, (82.5% identity in
                     160 aa overlap). Also highly similar to others e.g.
                     O69879|RS16_STRCO 30S RIBOSOMAL PROTEIN S16 from
                     Streptomyces coelicolor (139 aa), FASTA scores: opt: 486,
                     E(): 1.9e-20, (56.95% identity in 144 aa overlap);
                     P80379|RS16_THETH 30S RIBOSOMAL PROTEIN S16 from Thermus
                     Thermophilus (88 aa), FASTA scores: opt: 280, E():
                     4.8e-09, (53.25% identity in 77 aa overlap) (C-terminus
                     shorter); P21474|RS16_BACSU|RPSP 30S RIBOSOMAL PROTEIN S16
                     (BS17) from Bacillus subtilis (89 aa,), FASTA scores: opt:
                     258, E(): 8.2e-08, (42.85% identity in 91 aa overlap)
                     (C-terminus shorter); etc. BELONGS TO THE S16P FAMILY OF
                     RIBOSOMAL PROTEINS. Protein product from Mb2933c detected
                     using shotgun mass spectrometry and SWATH mass
                     spectrometry. Mb2933c found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:P66436"
                     /db_xref="InterPro:IPR000307"
                     /db_xref="InterPro:IPR020592"
                     /db_xref="InterPro:IPR023803"
                     /db_xref="UniProtKB/Swiss-Prot:P66436"
BEGIN
        1 MAVKIKLTRL GKIRNPQYRV AVADARTRRD GRAIEVIGRY HPKEEPSLIE INSERAQYWL
       61 SVGAQPTEPV LKLLKITGDW QKFKGLPGAQ GRLKVAAPKP SKLEVFNAAL AAADGGPTTE
      121 ATKPKKKSPA KKAAKAAEPA PQPEQPDTPA LGGEQAELTA ES
//