LOCUS       SIU01520.1               695 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE
            INTEGRAL MEMBRANE C-TYPE CYTOCHROME BIOGENESIS PROTEIN
            DIPZ protein.
ACCESSION   LT708304-2934
PROTEIN_ID  SIU01520.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="dipZ"
                     /locus_tag="BQ2027_MB2899"
                     /note="Mb2899, dipZ, len: 695 aa. Equivalent to Rv2874,
                     len: 695 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.9% identity in 695 aa overlap). Possible dipZ,
                     cytochrome c-type biogenesis protein (see citation below),
                     probable integral membrane protein, similar in part to
                     others or hypothetical proteins e.g. CAC48606|SMB20213
                     CONSERVED HYPOTHETICAL PROTEIN from Rhizobium meliloti
                     (Sinorhizobium meliloti) (627 aa), FASTA scores: opt: 844,
                     E(): 7.3e-43, (32.65% identity in 643 aa overlap);
                     Q9ZMH0|CCDA OR JHP0250 PUTATIVE CYTOCHROME C-TYPE
                     BIOGENESIS PROTEIN from Helicobacter pylori J99
                     (Campylobacter pylori J99) (239 aa), FASTA scores: opt:
                     250, E(): 1.4e-07, (27.3% identity in 227 aa overlap);
                     Q9LA04|CCDA C-TYPE CYTOCHROME BIOGENESIS PROTEIN from
                     Rhodobacter capsulatus (Rhodopseudomonas capsulata) (252
                     aa), FASTA scores: opt: 245, E(): 2.9e-07, (27.85%
                     identity in 244 aa overlap); etc. Also similar to
                     O06393|CCSA|Rv0527|MTCY25D10.06 CYTOCHROME C-TYPE
                     BIOGENESIS PROTEIN from Mycobacterium tuberculosis (259
                     aa), FASTA scores: opt: 280, E(): 2.4e-09, (29.3% identity
                     in 239 aa overlap). Protein product from Mb2899 detected
                     using shotgun mass spectrometry and SWATH mass
                     spectrometry. Mb2899 found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:P59960"
                     /db_xref="InterPro:IPR000866"
                     /db_xref="InterPro:IPR003834"
                     /db_xref="InterPro:IPR008979"
                     /db_xref="InterPro:IPR013766"
                     /db_xref="InterPro:IPR036249"
                     /db_xref="InterPro:IPR041017"
                     /db_xref="UniProtKB/Swiss-Prot:P59960"
BEGIN
        1 MVESRRAAAA ASAYASRCGI APATSQRSLA TPPTISVPSG EGRCRCHVAR GAGRDPRRRL
       61 RRRRWCGRCG YHSHLTGGEF DVNRLCQQRS RERSCQLVAV PADPRPKRQR ITDVLTLALV
      121 GFLGGLITGI SPCILPVLPV IFFSGAQSVD AAQVAKPEGA VAVRRKRALS ATLRPYRVIG
      181 GLVLSFGMVT LLGSALLSVL HLPQDAIRWA ALVALVAIGA GLIFPRFEQL LEKPFSRIPQ
      241 KQIVTRSNGF GLGLALGVLY VPCAGPILAA IVVAGATATI GLGTVVLTAT FALGAALPLL
      301 FFALAGQRIA ERVGAFRRRQ REIRIATGSV TILLAVALVF DLPAALQRAI PDYTASLQQQ
      361 ISTGTEIREQ LNLGGIVNAQ NAQLSNCSDG AAQLESCGTA PDLKGITGWL NTPGNKPIDL
      421 KSLRGKVVLI DFWAYSCINC QRAIPHVVGW YQAYKDSGLA VIGVHTPEYA FEKVPGNVAK
      481 GAANLGISYP IALDNNYATW TNYRNRYWPA EYLIDATGTV RHIKFGEGDY NVTETLVRQL
      541 LNDAKPGVKL PQPSSTTTPD LTPRAALTPE TYFGVGKVVN YGGGGAYDEG SAVFDYPPSL
      601 AANSFALRGR WALDYQGATS DGNDAAIKLN YHAKDVYIVV GGTGTLTVVR DGKPATLPIS
      661 GPPTTHQVVA GDRLASETLE VRPSKGLQVF SFTYG
//