LOCUS SIU01327.1 663 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE CONSERVED INTEGRAL MEMBRANE ALANINE AND VALINE AND LEUCINE RICH PROTEIN protein. ACCESSION LT708304-2741 PROTEIN_ID SIU01327.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB2709C" /note="Mb2709c, -, len: 663 aa. Equivalent to Rv2690c, len: 657 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 657 aa overlap). Probable conserved integral membrane ala-, val-, leu-rich protein, highly similar to others e.g. O54098|SC10A5.05 PUTATIVE MEMBRANE PROTEIN from Streptomyces coelicolor (691 aa), FASTA scores: opt: 2007, E(): 1.6e-116, (62.35% identity in 669 aa overlap); O69917|SC3C8.04c PUTATIVE INTEGRAL MEMBRANE PROTEIN from Streptomyces coelicolor (644 aa), FASTA scores: opt: 923, E(): 1.7e-49, (35.3% identity in 669 aa overlap); AAK78253|CAC0272 AMINO ACID TRANSPORTER from Clostridium acetobutylicum (620 aa), FASTA scores: opt: 674, E(): 4.1e-34, (36.55% identity in 640 aa overlap); etc. REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a single base transition (t-c) leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (663 aa versus 657 aa). Protein product from Mb2709c detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb2709c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="GOA:A0A1R3Y240" /db_xref="InterPro:IPR002293" /db_xref="UniProtKB/TrEMBL:A0A1R3Y240" BEGIN 1 MSKLSTAARR LLIGRPFRSD RLSHTLLPKR IALPVFASDA MSSIAYAPEE IFLVLSVAGL 61 AAYSMAPLIG LAVAAVLLVV VSSYRQNVHA YPSGGGDYEV VTTNLGATGG LVVASALMVD 121 YVLTVAVSIS SAASNIGSVS PFVYEHKVLF AVGAIVLIMA MNLRGVRESG LAFAIPTYAF 181 IAGIGTMLVW GLFRIFVLGN PVRAESAAFE MHAEHGQIVG FALVFLVARS FSSGCAALTG 241 VEAISNGVPA FQKPKSRNAA TTLLMLGIIA VSMFMGMIVL AVETGVQVVD DPDTQLTGAP 301 PGYQQKTLVA QLAQAVFGGF YLGFLLIAAV TALILVLAAN TAFNGFPVLG SVLAQHSYLP 361 RQLHTRGDRL AFSNGILFLA AAAIGAVVAF RAELTALIQL YIVGVFISFT MSQVGMVRHW 421 TRLLSAETDP RARRAMLRSR AVNTVGFVST GTVLLIVLVT KFLAGAWIAI VAMGGFFMMM 481 KLIHRHYDAV NRELAEQAEE AEITLPSRNH AVVLVSKLHL PTLRALTYAR ATRPDVLEAV 541 TVNVDDAETR ELVRQWQDSD VSVPLKVIAS PYREITRPVL DYVKRVSKES PRTVVTVFIP 601 EYVVGRWWEQ LLHNQSALRL KGRLLFMPGV MVTSVPWQLT SSERIKTLQP HAAPGDTRRG 661 IFD //