LOCUS SIU01258.1 580 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 ppe family protein ppe42 protein. ACCESSION LT708304-2672 PROTEIN_ID SIU01258.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PPE42" /locus_tag="BQ2027_MB2640" /note="Mb2640, PPE42, len: 580 aa. Equivalent to Rv2608, len: 580 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 580 aa overlap). Member of the Mycobacterium tuberculosis PPE family, highly similar to many e.g. O06828|Rv1430|MTCY493.24c from Mycobacterium tuberculosis (528 aa), FASTA scores: opt: 1004, E(): 5.9e-48, (56.05% identity in 307 aa overlap). Mb2640 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="InterPro:IPR000030" /db_xref="InterPro:IPR013228" /db_xref="InterPro:IPR029058" /db_xref="InterPro:IPR038332" /db_xref="UniProtKB/TrEMBL:A0A1R3Y246" BEGIN 1 MNFAVLPPEV NSARIFAGAG LGPMLAAASA WDGLAEELHA AAGSFASVTT GLAGDAWHGP 61 ASLAMTRAAS PYVGWLNTAA GQAAQAAGQA RLAASAFEAT LAATVSPAMV AANRTRLASL 121 VAANLLGQNA PAIAAAEAEY EQIWAQDVAA MFGYHSAASA VATQLAPIQE GLQQQLQNVL 181 AQLASGNLGS GNVGVGNIGN DNIGNANIGF GNRGDANIGI GNIGDRNLGI GNTGNWNIGI 241 GITGNGQIGF GKPANPDVLV VGNGGPGVTA LVMGGTDSLL SLPNIPLLEY AARFITPVHP 301 GYTATFLETP SQFFPFTGLN SLTYDVSVAQ GVTNLHTAIM AQLAAGNEVV VFGTSQSATI 361 ATFEMRYLQS LPAHLRPGLD ELSFTLTGNP NRPDGGILTR FGFSIPQLGF TLSGATPADA 421 YPTVDYAFQY DGVNDFPKYP LNVFATANAI AGILFLHSGL IALPPDLASG VVQPVSSPDV 481 LTTYILLPSQ DLPLLVPLRA IPLLGNPLAD LIQPDLRVLV ELGYDRTAHQ DVPSPFGLFP 541 DVDWAEVAAD LQQGAVQGVN DALSGLGLPP PWQPALPRLF //