LOCUS       SIU01203.1               904 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            ALANYL-TRNA SYNTHETASE ALAS (ALANINE--TRNA LIGASE) (ALANINE
            TRANSLASE) (ALARS) protein.
ACCESSION   LT708304-2617
PROTEIN_ID  SIU01203.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="alaS"
                     /locus_tag="BQ2027_MB2585C"
                     /note="Mb2585c, alaS, len: 904 aa. Equivalent to Rv2555c,
                     len: 904 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.9% identity in 904 aa overlap). Probable alaS,
                     alanyl-tRNA synthetase (EC 6.1.1.7), equivalent to
                     Q9CCT0|ALAS|ML0512 ALANYL-TRNA SYNTHETASE from
                     Mycobacterium leprae (908 aa), FASTA scores: opt: 5013,
                     E(): 0, (84.65% identity in 907 aa overlap). Also highly
                     similar to many e.g. Q9KXP9|ALAS from Streptomyces
                     coelicolor (890 aa), FASTA scores: opt: 2159, E():
                     3.8e-118, (53.45% identity in 907 aa overlap); Q9FFC7
                     Arabidopsis thaliana (Mouse-ear cress) (954 aa), FASTA
                     scores: opt: 1963, E(): 1.1e-106, (41.1% identity in 925
                     aa overlap); Q9RS27|DR2300 from Deinococcus radiodurans
                     (890 aa), FASTA scores: opt: 1352, E(): 4.1e-71, (38.05%
                     identity in 915 aa overlap); etc. BELONGS TO CLASS-II
                     AMINOACYL-TRNA SYNTHETASE FAMILY. Protein product from
                     Mb2585c detected using shotgun mass spectrometry and SWATH
                     mass spectrometry. Mb2585c found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:Q7TYB1"
                     /db_xref="InterPro:IPR002318"
                     /db_xref="InterPro:IPR003156"
                     /db_xref="InterPro:IPR009000"
                     /db_xref="InterPro:IPR012947"
                     /db_xref="InterPro:IPR018162"
                     /db_xref="InterPro:IPR018163"
                     /db_xref="InterPro:IPR018164"
                     /db_xref="InterPro:IPR018165"
                     /db_xref="InterPro:IPR023033"
                     /db_xref="UniProtKB/Swiss-Prot:Q7TYB1"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MQTHEIRKRF LDHFVKAGHT EVPSASVILD DPNLLFVNAG MVQFVPFFLG QRTPPYPTAT
       61 SIQKCIRTPD IDEVGITTRH NTFFQMAGNF SFGDYFKRGA IELAWALLTN SLAAGGYGLD
      121 PERIWTTVYF DDDEAVRLWQ EVAGLPAERI QRRGMADNYW SMGIPGPCGP SSEIYYDRGP
      181 EFGPAGGPIV SEDRYLEVWN LVFMQNERGE GTTKEDYQIL GPLPRNNIDT GMGVERIALV
      241 LQDVHNVYET DLLRPVIDTV ARVAARAYDV GNHEDDVRYR IIADHSRTAA ILIGDGVSPG
      301 NDGRGYVLRR LLRRVIRSAK LLGIDAAIVG DLMATVRNAM GPSYPELVAD FERISRIAVA
      361 EETAFNRTLA SGSRLFEEVA SSTKKSGATV LSGSDAFTLH DTYGFPIELT LEMAAETGLQ
      421 VDEIGFRELM AEQRRRAKAD AAARKHAHAD LSAYRELVDA GATEFTGFDE LRSQARILGI
      481 FVDGKRVPVV AHGVAGGAGE GQRVELVLDR TPLYAESGGQ IADEGTISGT GSSEAARAAV
      541 TDVQKIAKTL WVHRVNVESG EFVEGDTVIA AVDPGWRRGA TQGHSGTHMV HAALRQVLGP
      601 NAVQAGSLNR PGYLRFDFNW QGPLTDDQRT QVEEVTNEAV QADFEVRTFT EQLDKAKAMG
      661 AIALFGESYP DEVRVVEMGG PFSLELCGGT HVSNTAQIGP VTILGESSIG SGVRRVEAYV
      721 GLDSFRHLAK ERALMAGLAS SLKVPSEEVP ARVANLVERL RAAEKELERV RMASARAAAT
      781 NAAAGAQRIG NVRLVAQRMS GGMTAADLRS LIGDIRGKLG SEPAVVALIA EGESQTVPYA
      841 VAANPAAQDL GIRANDLVKQ LAVAVEGRGG GKADLAQGSG KNPTGIDAAL DAVRSEIAVI
      901 ARVG
//