LOCUS       SIU01201.1               417 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            CONSERVED MEMBRANE PROTEIN protein.
ACCESSION   LT708304-2615
PROTEIN_ID  SIU01201.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB2583C"
                     /note="Mb2583c, -, len: 417 aa. Equivalent to Rv2553c,
                     len: 417 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 417 aa overlap). Probable conserved
                     membrane protein, equivalent to Q9CCS8|ML0514 PUTATIVE
                     MEMBRANE PROTEIN from Mycobacterium leprae (421 aa), FASTA
                     scores: opt: 1955, E(): 1.1e-111, (72.7% identity in 414
                     aa overlap). Also similar in part to various proteins e.g.
                     Q9L9G6|NOVB NOVB PROTEIN (aminodesoxychorismate lyase)
                     from Streptomyces sphaeroides (284 aa), FASTA scores: opt:
                     451, E(): 2.9e-2, (37.95% identity in 203 aa overlap);
                     Q9EWY3|2SCG38.36 CONSERVED HYPOTHETICAL PROTEIN from
                     Streptomyces coelicolor (253 aa), FASTA scores: opt: 419,
                     E(): 2.3e-18, (39.2% identity in 171 aa overlap);
                     Q9CHT3|YGCC HYPOTHETICAL PROTEIN from Lactococcus lactis
                     (subsp. lactis) (Streptococcus lactis) (550 aa), FASTA
                     scores: opt: 379, E(): 1.2e-15, (23.0% identity in 417 aa
                     overlap); O25309|HP0587 AMINODEOXYCHORISMATE LYASE (PABC)
                     from Helicobacter pylori (Campylobacter pylori) (329 aa),
                     FASTA scores: opt: 290, E(): 2e-10, (31.65% identity in
                     180 aa overlap); etc. Protein product from Mb2583c
                     detected using SWATH mass spectrometry. Mb2583c found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing."
                     /db_xref="GOA:A0A1R3Y1I9"
                     /db_xref="InterPro:IPR003770"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y1I9"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MPDGGHRHRA QPVSVRPNRH RRTRVSRAQR RHAQQIRRRR RVAGGFALSL LVVVVVVAVV
       61 VGAKLWQTML GFGNDYTGPG KRDIVIQIRA GDSTTAVGET LLKHGVVATV RAFVDAAHGN
      121 TAISSIQPGF YRMRTEISAA SAVARLTDPH NRVGKLVIPE GRQLDDTTDM KTNVVNPGIF
      181 ALISRATCVD LDGTQRCVSV ADLRAAASRS TPTMLSVPRW AVGPVMELGT DHRRIEGLIA
      241 PGTFNIDPSA SAETILATLI SAGAVEYMKS GLVDTAKSLG LSPYDILVVA SLVQQEANTQ
      301 DFPKVARVIY NRLHEHRTLE FDSTVNYPLD RREVATSDTD RAQRTPWNTY MAQGLPATAI
      361 CSPGVDALRA AEHPVPGDWL YFVTIDSQGT TLFTRDYQQH LANIELAKHN GVLDSAR
//