LOCUS       SIU01084.1               104 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 50s
            ribosomal protein l21 rplu protein.
ACCESSION   LT708304-2498
PROTEIN_ID  SIU01084.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="rplU"
                     /locus_tag="BQ2027_MB2469C"
                     /note="Mb2469c, rplU, len: 104 aa. Equivalent to Rv2442c,
                     len: 104 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 104 aa overlap). Probable rplU, 50S
                     RIBOSOMAL PROTEIN L21, equivalent to Q9CBZ2|RL21_MYCLE
                     from Mycobacterium leprae (103 aa), FASTA scores: opt:
                     579, E(): 4.8e-31, (91.1% identity in 102 aa overlap).
                     Also highly similar to others e.g. P95756|RL21_STRGR from
                     Streptomyces griseus (106 aa), FASTA scores: opt: 362,
                     E(): 5.4e-17, (56.0% identity in 100 aa overlap); etc.
                     Protein product from Mb2469c detected using shotgun mass
                     spectrometry and SWATH mass spectrometry. Mb2469c found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:P66118"
                     /db_xref="InterPro:IPR001787"
                     /db_xref="InterPro:IPR018258"
                     /db_xref="InterPro:IPR028909"
                     /db_xref="InterPro:IPR036164"
                     /db_xref="UniProtKB/Swiss-Prot:P66118"
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MMATYAIVKT GGKQYKVAVG DVVKVEKLES EQGEKVSLPV ALVVDGATVT TDAKALAKVA
       61 VTGEVLGHTK GPKIRIHKFK NKTGYHKRQG HRQQLTVLKV TGIA
//