LOCUS       SIU00989.1               614 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 ppe
            family protein ppe40 protein.
ACCESSION   LT708304-2403
PROTEIN_ID  SIU00989.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PPE40"
                     /locus_tag="BQ2027_MB2377C"
                     /note="Mb2377c, PPE40, len: 614 aa. Equivalent to Rv2356c,
                     len: 615 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.8% identity in 615 aa overlap). Member of
                     Mycobacterium tuberculosis PPE_family, highly similar to
                     others e.g. Q10778|MTCY48.17|YF48_MYCTU HYPOTHETICAL
                     PPE-FAMILY PROTEIN (678 aa), FASTA scores: opt: 1888, E():
                     1.9e-78, (54.4% identity in 667 aa overlap);
                     Q10540|MTCY31.06c, E241779|MTCY98, P42611|MTV037.06c,
                     Q10813|MTCY274.23c, P71657|MTCY02B10.25c, MTCY03C7.23,
                     P71869|MTCY03C7.24c, etc. REMARK-M.bovis-M.tuberculosis:
                     In Mycobacterium bovis, a 3 bp deletion (gcg-*) leads to a
                     slightly shorter product compared to its homolog in
                     Mycobacterium tuberculosis strain H37Rv (614 aa versus 615
                     aa). Mb2377c found to be expressed during exponential
                     growth in Sauton's minimal media by RNA-sequencing (TPM >
                     20)."
                     /db_xref="InterPro:IPR000030"
                     /db_xref="InterPro:IPR002989"
                     /db_xref="InterPro:IPR038332"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y0Z4"
BEGIN
        1 MVNFSVLPPE INSGRMFFGA GSGPMLAAAA AWDGLAAELG LAAESFGLVT SGLAGGSGQA
       61 WQGAAAAAMV VAAAPYAGWL AAAAARAGGA AVQAKAVAGA FEAARAAMVD PVVVAANRSA
      121 FVQLVLSNVF GQNAPAIAAA EATYEQMWAA DVAAMVGYHG GASAAAALAP WQQAVPGLSG
      181 LLGGAANAPA AAAQGAAQGL AELTLNLGVG NIGSLNLGSG NIGGTNVGSG NVGGTNLGSG
      241 NYGSLNWGSG NTGTGNAGSG NTGDYNPGSG NFGSGNFGSG NIGSLNVGSG NFGTLNLANG
      301 NNGDVNFGGG NTGDFNFGGG NNGTLNFGFG NTGSGNFGFG NTGNNNIGIG LTGDGQIGIG
      361 GLNSGTGNIG FGNSGNNNIG FFNSGDGNIG FFNSGDGNTG FGNAGNINTG FWNAGNLNTG
      421 FGSAGNGNVG IFDGGNSNSG SFNVGFQNTG FGNSGAGNTG FFNAGDSNTG FANAGNVNTG
      481 FFNGGDINTG GFNGGNVNTG FGSALTQAGA NSGFGNLGTG NSGWGNSDPS GTGNSGFFNT
      541 GNGNSGFSNA GPAMLPGFNS GFANIGSFNA GIANSGNNLA GISNSGDDSS GAVNSGSQNS
      601 GAFNAGVGLS GFFR
//