LOCUS SIU00989.1 614 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 ppe family protein ppe40 protein. ACCESSION LT708304-2403 PROTEIN_ID SIU00989.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PPE40" /locus_tag="BQ2027_MB2377C" /note="Mb2377c, PPE40, len: 614 aa. Equivalent to Rv2356c, len: 615 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 615 aa overlap). Member of Mycobacterium tuberculosis PPE_family, highly similar to others e.g. Q10778|MTCY48.17|YF48_MYCTU HYPOTHETICAL PPE-FAMILY PROTEIN (678 aa), FASTA scores: opt: 1888, E(): 1.9e-78, (54.4% identity in 667 aa overlap); Q10540|MTCY31.06c, E241779|MTCY98, P42611|MTV037.06c, Q10813|MTCY274.23c, P71657|MTCY02B10.25c, MTCY03C7.23, P71869|MTCY03C7.24c, etc. REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 3 bp deletion (gcg-*) leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (614 aa versus 615 aa). Mb2377c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="InterPro:IPR000030" /db_xref="InterPro:IPR002989" /db_xref="InterPro:IPR038332" /db_xref="UniProtKB/TrEMBL:A0A1R3Y0Z4" BEGIN 1 MVNFSVLPPE INSGRMFFGA GSGPMLAAAA AWDGLAAELG LAAESFGLVT SGLAGGSGQA 61 WQGAAAAAMV VAAAPYAGWL AAAAARAGGA AVQAKAVAGA FEAARAAMVD PVVVAANRSA 121 FVQLVLSNVF GQNAPAIAAA EATYEQMWAA DVAAMVGYHG GASAAAALAP WQQAVPGLSG 181 LLGGAANAPA AAAQGAAQGL AELTLNLGVG NIGSLNLGSG NIGGTNVGSG NVGGTNLGSG 241 NYGSLNWGSG NTGTGNAGSG NTGDYNPGSG NFGSGNFGSG NIGSLNVGSG NFGTLNLANG 301 NNGDVNFGGG NTGDFNFGGG NNGTLNFGFG NTGSGNFGFG NTGNNNIGIG LTGDGQIGIG 361 GLNSGTGNIG FGNSGNNNIG FFNSGDGNIG FFNSGDGNTG FGNAGNINTG FWNAGNLNTG 421 FGSAGNGNVG IFDGGNSNSG SFNVGFQNTG FGNSGAGNTG FFNAGDSNTG FANAGNVNTG 481 FFNGGDINTG GFNGGNVNTG FGSALTQAGA NSGFGNLGTG NSGWGNSDPS GTGNSGFFNT 541 GNGNSGFSNA GPAMLPGFNS GFANIGSFNA GIANSGNNLA GISNSGDDSS GAVNSGSQNS 601 GAFNAGVGLS GFFR //