LOCUS       SIU00956.1               274 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            SUGAR-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER
            USPB protein.
ACCESSION   LT708304-2370
PROTEIN_ID  SIU00956.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="uspB"
                     /locus_tag="BQ2027_MB2344"
                     /note="Mb2344, uspB, len: 274 aa. Equivalent to Rv2317,
                     len: 274 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 274 aa overlap). Probable uspB,
                     sugar-transport integral membrane protein ABC transporter
                     (see citation below), most similar to Q9CBN7|USPE|ML1769
                     SUGAR TRANSPORT INTEGRAL MEMBRANE PROTEIN from
                     Mycobacterium leprae (274 aa), FASTA scores: opt: 1522,
                     E(): 3.4e-89, (85.0% identity in 274 aa overlap); and
                     similar to O32941|ML1425|MLCB2052.29 PROBABLE
                     ABC-TRANSPORT PROTEIN, INNER MEMBRANE COMPONENT from
                     Mycobacterium leprae (283 aa), FASTA scores: opt: 630,
                     E(): 8.4e-33, (36.55% identity in 268 aa overlap). Also
                     similar to other integral membrane proteins e.g.
                     P73854|LACG|SLR1723 LACTOSE TRANSPORT SYSTEM PERMEASE
                     PROTEIN from Synechocystis sp. strain PCC 6803 (270 aa),
                     FASTA scores: opt: 605, E(): 3.1e-31, (36.0% identity in
                     264 aa overlap); Q9F3B8|SC5F1.11 PUTATIVE SUGAR TRANSPORT
                     INTEGRAL MEMBRANE PROTEIN from Streptomyces coelicolor
                     (307 aa), FASTA scores: opt: 582, E(): 9.7e-30, (34.45%
                     identity in 264 aa overlap); etc. Also similar to
                     O53483|Rv2039c|MTV018.26c SUGAR TRANSPORT PROTEIN from
                     Mycobacterium tuberculosis (280 aa), FASTA scores: opt:
                     630, E(): 8.3e-89, (37.7% identity in 268 aa overlap)."
                     /db_xref="GOA:A0A1R3Y122"
                     /db_xref="InterPro:IPR000515"
                     /db_xref="InterPro:IPR035906"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y122"
BEGIN
        1 MSSPSRVSNT AVYAVLTIGA VITLSPFLLG LLTSFTSAHQ FATGTPLQLP RPPTLANYAD
       61 IADAGFRRAA VVTALMTAVI LLGQLTFSVL AAYAFARLQF RGRDALFWVY VATLMVPGTV
      121 TVVPLYLMMA QLGLRNTFWA LVLPFMFGSP YAIFLLREHF RLIPDDLINA ARLDGANTLD
      181 VIVHVVIPSS RPVLAALAMI TVVSQWNNFM WPLVITSGHK WRVLTVATAD LQSRFNDQWT
      241 LVMAATTVAI VPLIALFVTF QRHIVASIVV SGLK
//