LOCUS       SIU00955.1               290 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            SUGAR-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER
            USPA protein.
ACCESSION   LT708304-2369
PROTEIN_ID  SIU00955.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="uspA"
                     /locus_tag="BQ2027_MB2343"
                     /note="Mb2343, uspA, len: 290 aa. Equivalent to Rv2316,
                     len: 290 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.7% identity in 290 aa overlap). Probable uspA,
                     sugar-transport integral membrane protein ABC transporter
                     (see citation below), most similar to Q9CBN8|USPA|ML1768
                     SUGAR TRANSPORT INTEGRAL MEMBRANE PROTEIN from
                     Mycobacterium leprae (328 aa), FASTA scores: opt: 1593,
                     E(): 1.9e-93, (82.35% identity in 289 aa overlap); and
                     similar to O32940|ML1426|MLCB2052.28 POSSIBLE SUGAR
                     TRANSPORT PROTEIN (PROBABLE ABC-TRANSPORT PROTEIN, INNER
                     MEMBRANE COMPONENT) from Mycobacterium leprae (319 aa),
                     FASTA scores: opt: 600, E(): 9.2e-31, (34.25% identity in
                     295 aa overlap). Also similar to other proteins involved
                     in transport e.g. Q9X860|SCE134.05c PUTATIVE BINDING
                     PROTEIN DEPENDENT TRANSPORT PROTEIN from Streptomyces
                     coelicolor (327 aa), FASTA scores: opt: 639, E(): 3.2e-33,
                     (40.45% identity in 272 aa overlap); Q9K6N9|BH3689 SUGAR
                     TRANSPORT SYSTEM (PERMEASE) from Bacillus halodurans (300
                     aa), FASTA scores: opt: 590, E(): 3.7e-30, (35.65%
                     identity in 289 aa overlap); etc."
                     /db_xref="GOA:A0A1R3Y1M8"
                     /db_xref="InterPro:IPR000515"
                     /db_xref="InterPro:IPR035906"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y1M8"
BEGIN
        1 MRDAPRRRTA LAYALLAPSL VGVVAFLLLP ILVVVWLSLH RWDLLGPLRY VGLTNWRSVL
       61 TDSGFADSLV VTAVFVAIVV PAQTVLGLLA ASLLARRLPG TGLFRTLYVL PWICAPLAIA
      121 VMWRWILAPT DGAISTVLGH RIEWLTDPGL ALPVVSAVVV WTNVGYVSLF FLAGLMAIPQ
      181 DIHNAARTDG ASAWQRFWRI TLPMLRPTMF FVLVTGIISA AQVFDTVYAL TGGGPQGSTD
      241 LVAHRIYAEA FGAAAIGRAS VMAVVLFVIL VGATVVQHLY FRRRISYELT
//