LOCUS SIU00947.1 151 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE INTEGRASE (FRAGMENT) protein. ACCESSION LT708304-2361 PROTEIN_ID SIU00947.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB2335C" /note="Mb2335c, -, len: 151 aa. Equivalent to Rv2309c, len: 151 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 151 aa overlap). Possible integrase (fragment), similar to others e.g. Q48908 INTEGRASE (FRAGMENT) from Mycobacterium paratuberculos (191 aa), FASTA scores: opt: 279, E(): 3.2e-11, (40.4% identity in 136 aa overlap); etc. Also similar to others from Mycobacterium tuberculosis e.g. Rv1055|MTV017.08 INTEGRASE (FRAGMENT) (78 aa) (72.85% identity in 70 aa overlap); and Rv1054|MTV017.07 INTEGRASE (FRAGMENT). COULD BELONG TO THE 'PHAGE' INTEGRASE FAMILY. Mb2335c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y177" /db_xref="InterPro:IPR002104" /db_xref="InterPro:IPR011010" /db_xref="InterPro:IPR013762" /db_xref="InterPro:IPR014417" /db_xref="UniProtKB/TrEMBL:A0A1R3Y177" BEGIN 1 MTGAGIVETT TNRVRHVPVP EPVSERLRDE LPTEPNALVF PSYRGGHLPI EEYRRAFDKG 61 CKAVGIADLV PHGLRHTTAS LAISAGANVK VVQRLLGHAT AAMTLDRHGH LLSDDLAGVA 121 GLLVQAIKSA AASLRYSDPD SVAVENISAA S //