LOCUS       SIU00947.1               151 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE
            INTEGRASE (FRAGMENT) protein.
ACCESSION   LT708304-2361
PROTEIN_ID  SIU00947.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB2335C"
                     /note="Mb2335c, -, len: 151 aa. Equivalent to Rv2309c,
                     len: 151 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 151 aa overlap). Possible integrase
                     (fragment), similar to others e.g. Q48908 INTEGRASE
                     (FRAGMENT) from Mycobacterium paratuberculos (191 aa),
                     FASTA scores: opt: 279, E(): 3.2e-11, (40.4% identity in
                     136 aa overlap); etc. Also similar to others from
                     Mycobacterium tuberculosis e.g. Rv1055|MTV017.08 INTEGRASE
                     (FRAGMENT) (78 aa) (72.85% identity in 70 aa overlap); and
                     Rv1054|MTV017.07 INTEGRASE (FRAGMENT). COULD BELONG TO THE
                     'PHAGE' INTEGRASE FAMILY. Mb2335c found to be expressed
                     during exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /db_xref="GOA:A0A1R3Y177"
                     /db_xref="InterPro:IPR002104"
                     /db_xref="InterPro:IPR011010"
                     /db_xref="InterPro:IPR013762"
                     /db_xref="InterPro:IPR014417"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y177"
BEGIN
        1 MTGAGIVETT TNRVRHVPVP EPVSERLRDE LPTEPNALVF PSYRGGHLPI EEYRRAFDKG
       61 CKAVGIADLV PHGLRHTTAS LAISAGANVK VVQRLLGHAT AAMTLDRHGH LLSDDLAGVA
      121 GLLVQAIKSA AASLRYSDPD SVAVENISAA S
//