LOCUS SIU00694.1 1194 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 cobalamin biosynthesis protein cobn protein. ACCESSION LT708304-2108 PROTEIN_ID SIU00694.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="cobN" /locus_tag="BQ2027_MB2088C" /note="Mb2088c, cobN, len: 1194 aa. Equivalent to Rv2062c, len: 1194 aa, from Mycobacterium tuberculosis strain H37Rv, (99.9% identity in 1194 aa overlap). Probable cobN, cobalamin biosynthesis protein - very similar to COBN_PSEDE P29929 cobn protein. Pseudomonas denitrifica (1275 aa), FASTA scores, opt: 831, E(): 0, (37.5% identity in 983 aa overlap). Also similar to several Mg2+-chelatases e.g. H64479 magnesium chelatase subunit homolog (1226 aa)opt: 962 E(): 0; (27.3% identity in 846 aa overlap) Protein product from Mb2088c detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb2088c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y298" /db_xref="InterPro:IPR003672" /db_xref="InterPro:IPR011953" /db_xref="UniProtKB/TrEMBL:A0A1R3Y298" BEGIN 1 MPEPTVLLLS TSDTDLISAR SSGKNYRWAN PSRLSDLELT DLLAEASIVV IRILGGYRAW 61 QSGIDTVIAG GVPAALVSGE QAADAELTDR STVAAGTALQ AHIYLAHGGV DNLRELHAFL 121 CDTVLMTGFG FTPPVATPTW GVLERPDAGK TGPTIAVLYY RAQHLAGNTG YVEALCRAIE 181 DAGGRPLPLY CASLRTAEPR LLERLGGADA MVVTVLAAGG VKPAAASAGG DDDSWNVEHL 241 AALDIPILQG LCLTSPRDQW CANDDGLSPL DVASQVAVPE FDGRIITVPF SFKEIDDDGL 301 ISYVADPERC ARVAGLAVRH ARLRQVAPAD KRVALVFSAY PTKHARIGNA VGLDTPASAV 361 ALLQAMRQRG YRVGDLPGVE SNDGDALIHA LIECGGHDPD WLTEGQLAGN PIRVSAKEYR 421 DWFATLPAEL TDVVTAYWGP PPGELFVDRS HDPDGEIVIA ALRAGNLVLM VQPPRGFGEN 481 PVAIYHDPDL PPSHHYLAAY RWLDTGFSNG FGAHAVVHLG KHGNLEWLPG KTLGMSASCG 541 PDAALGDLPL IYPFLVNDPG EGTQAKRRAH AVLVDHLIPP MARAETYGDI ARLEQLLDEH 601 ASVAALDPGK LPAIRQQIWT LIRAAKMDHD LGLTERPEED SFDDMLLHVD GWLCEIKDVQ 661 IRDGLHILGQ NPTGEQELDL VLAILRARQL FGGAHAIPGL RQALGLAEDG TDERATVDQT 721 EAKARELVAA LQATGWDPSA ADRLTGNADA AAVLRFAATE VIPRLAGTAT EIEQVLRALD 781 GRFIPAGPSG SPLRGLVNVL PTGRNFYSVD PKAVPSRLAW EAGVALADSL LARYRDEHGR 841 WPRSVGLSVW GTSAMRTAGD DIAEVLALLG VRPVWDDASR RVIDLAPMQP AELGRPRIDV 901 TVRISGFFRD AFPHVVTMLD DAVRLVADLD EAAEDNYVRA HAQADLAHHG DQRRATTRIF 961 GSKPGTYGAG LLQLIDSRSW RDDADLAQVY TAWGGFAYGR DLDGREAIDD MNRQYRRIAV 1021 AAKNTDTREH DIADSDDYFQ YHGGMVATVR ALTGQAPAAY IGDNTRPDAI RTRTLSEETT 1081 RVFRARVVNP RWMAAMRRHG YKGAFEMAAT VDYLFGYDAT AGVMADWMYE QLTQRYVLDA 1141 QNRTFMTESN PWALHGMAER LLEAAGRGLW AQPAPETLDG LRQVLLETEG DLEA //