LOCUS SIU00691.1 78 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 50s ribosomal protein l28 rpmb2 protein. ACCESSION LT708304-2104 PROTEIN_ID SIU00691.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="rpmB2" /locus_tag="BQ2027_MB2084C" /note="Mb2084c, rpmB2, len: 78 aa. Equivalent to Rv2058c, len: 78 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 78 aa overlap). Probable rpmB2, ribosomal protein L28, very similar to rL28 of M. tuberculosis. FASTA results: RL28_MYCTU Q10879 50S ribosomal protein L28. mycobacter (94 aa) opt: 338; E(): 9.8e-19; 64.9% identity in 77 aa overlap. Also similar to rpmB (Rv0105c) of Mycobacterium tuberculosis. Protein product from Mb2084c detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb2084c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="GOA:P66149" /db_xref="InterPro:IPR001383" /db_xref="InterPro:IPR026569" /db_xref="InterPro:IPR034704" /db_xref="InterPro:IPR037147" /db_xref="UniProtKB/Swiss-Prot:P66149" BEGIN 1 MSAHCQVTGR KPGFGNTVSH SHRRSRRRWS PNIQQRTYYL PSEGRRIRLR VSTKGIKVID 61 RDGIEAVVAR LRRQGQRI //