LOCUS SIU00685.1 534 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster protein. ACCESSION LT708304-2098 PROTEIN_ID SIU00685.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB2078C" /note="Mb2078c, -, len: 534 aa. Equivalent to Rv2052c, len: 534 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 534 aa overlap). Conserved hypothetical protein, very similar to hypothetical protein SC6D7.15 (536 aa) from Streptomyces coelicolor A3(2). Smith-Waterman scores >emb|CAB61667.1| (AL133213) hypothetical protein SC6D7.15 [Streptomyces coelicolor A3(2)] Expect = e-113 Identities = 247/533 (46%) Protein product from Mb2078c detected using SWATH mass spectrometry. Mb2078c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /db_xref="GOA:A0A1R3Y0U8" /db_xref="InterPro:IPR011059" /db_xref="InterPro:IPR013108" /db_xref="InterPro:IPR032466" /db_xref="InterPro:IPR033932" /db_xref="UniProtKB/TrEMBL:A0A1R3Y0U8" BEGIN 1 MSQIPVKLLV NGRVYSPTHP EATAMAVRGD VVAWLGSDDV GRDQFPDADV QDLDGRFVAP 61 GFVDSHIHLT ATGLMLSGLD LRPATSRAQC LRMVADYAAD HPGQPLWGHG WDESAWPENA 121 APSTADLDAV LGDCPAYLAR IDSHSALVSS GLRRLVPELA AATGYTAQRP LTGDAHHLAR 181 AAARYLLTDV QLADARAVAL QAIAAAGVVA VHECAGPEIG GLDDWLRLRA LEHGVEVIGY 241 WGEAVATPAQ ARDLVTETGA RGLAGDLFVD GALGSRTAWL HEPYADAPDC IGTCHLDVDG 301 IEAHVRACTK AEVTAGFHVI GDAAVSAAVA AFERVVADLG VVAVARCGHR LEHVEMVTAD 361 QAAKLGAWGV IASVQPNFDE LWGGGDGMYA RRLGAQRGSE LNPLALLASQ GVPLALGSDA 421 PVTGFDPWAS VRAAVNHRTP GSGVSARAAF AAATRGGWRA GGVRDGRIGT LVPGAPASYA 481 IWDAGDFDVD APRDAVQRWS TDPRSRVPAL PRLGPTDALP RCRQTVHRGA VIYG //