LOCUS       SIU00587.1               300 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 CONSERVED
            HYPOTHETICAL PROTEIN protein.
ACCESSION   LT708304-2000
PROTEIN_ID  SIU00587.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB1984C"
                     /note="Mb1984c, -, len: 300 aa. Equivalent to Rv1949c,
                     len: 319 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.7% identity in 300 aa overlap). Conserved hypothetical
                     protein, partial ORF. Rv1949c and Rv1950c|MTCY09F9.14 are
                     similar but frameshifted with respect to
                     Rv2077c|MTCY49.16C|Q10685 hypothetical 33.3 kd protein
                     (323 aa), FASTA scores: opt: 459, E(): 2.8e-16, (54.8%
                     identity in 157 aa overlap). Cosmid sequence appears to be
                     correct, genomic sequence is also frameshifted in
                     Mycobacterium bovis strain AF2122/97. Similar to M.
                     tuberculosis hypothetical proteins: Rv2542, Rv2077c,
                     Rv2797c, Rv0963c, etc."
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y079"
BEGIN
        1 MRQASGLARE GAGTIGAAQR RVIYAVQDAH NAGFNVEEDL SVTDTRTSRT FAEQAARQAQ
       61 AQALAGDIRQ RATQLIGVEH EVAAKIATAT APLNTVGFHE PPIAPSLPTP VPHNEKPQIH
      121 AVDRSWKQDP PSPMPGDPKD MTAVQARAAW DAVNADIARY NARCGRTFVL PNEQAAYDAC
      181 IADKGSLLER QAAIRARLGE LGVPVEGEPP PAPDPAGPQP NEGLPPPGVS PPAESNLTVG
      241 PPSRPIQQAR GGESLWDENG GEWRYFPGDN YRYPHWDYNP HDSPTARWQN IPIGDLPTHK
//