LOCUS       SIU00558.1               287 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            MEMBRANE PROTEIN protein.
ACCESSION   LT708304-1971
PROTEIN_ID  SIU00558.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB1955"
                     /note="Mb1955, -, len: 287 aa. Equivalent to Rv1920, len:
                     287 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.7% identity in 287 aa overlap). Probable membrane
                     protein, similar to AL0215|SC10A5.04 putative membrane
                     protein from Streptomyces coelicolor cosmid 10A5 (295 aa),
                     FASTA scores: opt: 292, E(): 3.6e-13, (31.3% identity in
                     243 aa overlap). Also weakly similar to several
                     Mycobacterial putative proteins with unknown function e.g.
                     Rv0502, Rv1428c, U00018_22 Mycobacterium leprae cosmid
                     B2168. Protein product from Mb1955 detected using shotgun
                     mass spectrometry and SWATH mass spectrometry. Mb1955
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
                     /db_xref="GOA:A0A1R3XZR3"
                     /db_xref="InterPro:IPR002123"
                     /db_xref="InterPro:IPR016676"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3XZR3"
BEGIN
        1 MFPRWPQQAH NHEVSRADTV SVPRAPTQAE VAAVLRIMTP LRKVIKPKVY GIENVPTERA
       61 LLVGNHNTLG LVDAPLLAAE LWERGRIVRS LGDHAHFKIP GWRDALTRTG VVEGTREITS
      121 ELMRRGELVI VFPGGAREVN KRKNERYKLV WKNRLGFARL AIQHGYPIVP FASVGAEHGI
      181 DIVLDNESPL LAPVQFLAEK LLGTKDGPAL VRGVGLTPVP RPERQYYWFG EPIDTTEFMG
      241 QQADDNAARR VRERAAAAIE HGIELMLAER AADPNRSLVG RLLRSDA
//