LOCUS SIU00558.1 287 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE MEMBRANE PROTEIN protein. ACCESSION LT708304-1971 PROTEIN_ID SIU00558.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB1955" /note="Mb1955, -, len: 287 aa. Equivalent to Rv1920, len: 287 aa, from Mycobacterium tuberculosis strain H37Rv, (99.7% identity in 287 aa overlap). Probable membrane protein, similar to AL0215|SC10A5.04 putative membrane protein from Streptomyces coelicolor cosmid 10A5 (295 aa), FASTA scores: opt: 292, E(): 3.6e-13, (31.3% identity in 243 aa overlap). Also weakly similar to several Mycobacterial putative proteins with unknown function e.g. Rv0502, Rv1428c, U00018_22 Mycobacterium leprae cosmid B2168. Protein product from Mb1955 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb1955 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." /db_xref="GOA:A0A1R3XZR3" /db_xref="InterPro:IPR002123" /db_xref="InterPro:IPR016676" /db_xref="UniProtKB/TrEMBL:A0A1R3XZR3" BEGIN 1 MFPRWPQQAH NHEVSRADTV SVPRAPTQAE VAAVLRIMTP LRKVIKPKVY GIENVPTERA 61 LLVGNHNTLG LVDAPLLAAE LWERGRIVRS LGDHAHFKIP GWRDALTRTG VVEGTREITS 121 ELMRRGELVI VFPGGAREVN KRKNERYKLV WKNRLGFARL AIQHGYPIVP FASVGAEHGI 181 DIVLDNESPL LAPVQFLAEK LLGTKDGPAL VRGVGLTPVP RPERQYYWFG EPIDTTEFMG 241 QQADDNAARR VRERAAAAIE HGIELMLAER AADPNRSLVG RLLRSDA //